Ligand clusters for UniProt code Q06528

Ligand clusters for Q06528: Carminomycin 4-O-methyltransferase DnrK from Streptomyces peucetius

		Top 6 (of 9) ligand clusters Cluster 1. 8 ligand types 18 ligands Cluster 2. 1 ligand type 1 ligand Cluster 3. 1 ligand type 2 ligands Cluster 4. 1 ligand type 3 ligands Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 4wxhA

Structures

PDB		Schematic diagram
4wxhA
1tw3A
5jr3A
5eehA
1tw2A
		more ...

Cluster 1 contains 8 ligand types

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Ligand		Description
		1. Ligand: P9P × 6 2-Chloranyl-4-Nitro-Phenol PDB codes: 5eeh(A),
		2. Ligand: SAH × 5 S-Adenosyl-L-Homocysteine PDB codes: 1tw2(A), 1tw3(A), 4wxh(A), 5eeh(A), 5jr3(A).
		3. Ligand: ERT × 2 Methyl (4r)-2-Ethyl-2,5,12-Trihydroxy-7-Methoxy-6,11- Dioxo-4-{[2,3,6-Trideoxy-3-(Dimethylamino)- Beta-D- Ribo-Hexopyranosyl]oxy}-1h,2h,3h,4h,6h,11h-Tetracene- 1-Carboxylate PDB codes: 1tw2(A), 1tw3(A).
		4. Ligand: 3VL × 1 Methyl (1r,2r,4s)-2-Ethyl-2,5,7-Trihydroxy-6,11-Dioxo- 4-{[2,3,6-Trideoxy-3-(Dimethylamino)-Alpha- L-Lyxo- Hexopyranosyl]oxy}-1,2,3,4,6,11-Hexahydrotetracene-1- Carboxylate PDB code: 4wxh(A).
		5. Ligand: 4MU × 1 7-Hydroxy-4-Methyl-2h-Chromen-2-One PDB code: 5jr3(A).
		6. Ligand: DTU × 1 (2r,3s)-1,4-Dimercaptobutane-2,3-Diol PDB code: 4wxh(A).
		7. Ligand: S8M × 1 (2~{r},3~{r},4~{s},5~{s})-2-(6-Aminopurin-9-Yl)-5- [[(3~{s})-3-Azanyl-3-(1~{h}-1,2,3,4-Tetrazol-5- Yl) propyl]sulfanylmethyl]oxolane-3,4-Diol PDB code: 5eeg(A).
		8. Ligand: SO4 × 1 Sulfate ion PDB code: 5eeh(A).

Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: P9P × 1 2-Chloranyl-4-Nitro-Phenol PDB code: 5eeh(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 2 Sulfate ion PDB codes: 4wxh(A), 5eeh(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 3 Sulfate ion PDB codes: 4wxh(A), 5eeh(A), 5jr3(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 1 Sulfate ion PDB code: 4wxh(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 1 Sulfate ion PDB code: 5eeh(A).