Ligand clusters for UniProt code Q03181

Ligand clusters for Q03181: Peroxisome proliferator-activated receptor delta from Homo sapiens

		Top 6 (of 18) ligand clusters Cluster 1. 44 ligand types 61 ligands Cluster 2. 9 ligand types 77 ligands Cluster 3. 3 ligand types 9 ligands Cluster 4. 2 ligand types 9 ligands Cluster 5. 2 ligand types 4 ligands Cluster 6. 2 ligand types 2 ligands
Representative protein: 1gwxA

Structures

PDB		Schematic diagram
1gwxA
2xyxA
2xywA
3sp9A
3tkmA
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Cluster 1 contains 44 ligand types (of which only 20 are listed. Click for all)

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Ligand		Description
		1. Ligand: EPA × 1 icosapent 5,8,11,14,17-Eicosapentaenoic acid PDB code: 3gwx(A).
		2. Ligand: IL2 × 1 iloprost (5e)-5-[(3as,4r,5r,6as)-5-Hydroxy-4-[(1e,3s,4r)-3- Hydroxy-4-Methyloct-1-En-6-Yn-1- Yl]hexahydropentalen- 2(1h)-Ylidene]pentanoic acid PDB code: 3sp9(A).
		3. Ligand: PGO × 16 S-1,2-Propanediol PDB codes: 5u3q(A), 5u3r(A), 5u3s(A), 5u3t(A), 5u3u(A), 5u3v(A), 5u3w(A), 5u3x(A), 5u3y(A), 5u3z(A), 5u41(A), 5u42(A), 5u43(A), 5u44(A), 5u45(A).
		4. Ligand: VCA × 3 Vaccenic acid PDB codes: 2awh(A), 2b50(A), 2baw(A).
		5. Ligand: 08S × 1 3-Chloro-6-Fluoro-N-[2-[4-[(5-Propan-2-Yl-1,3,4- Thiadiazol-2-Yl)sulfamoyl]phenyl]ethyl]-1- Benzothiophene-2-Carboxamide PDB code: 2xyw(A).
		6. Ligand: 1FA × 1 [(7-{[2-(3-Morpholin-4-Ylprop-1-Yn-1-Yl)-6-{[4- (Trifluoromethyl)phenyl]ethynyl}pyridin-4-Yl]thio}- 2, 3-Dihydro-1h-Inden-4-Yl)oxy]acetic acid PDB code: 2q5g(A).
		7. Ligand: 331 × 1 (2s)-2-(4-[2-(3-[2,4-Difluorophenyl]-1-Heptylureido) ethyl]phenoxy)-2-Methylbutyric acid PDB code: 1y0s(A).
		8. Ligand: 3EQ × 1 [(4-{Butyl[2-Methyl-4'-(Methylsulfanyl)biphenyl-3- Yl]sulfamoyl}naphthalen-1-Yl)oxy]acetic acid PDB code: 3peq(A).
		9. Ligand: 3OZ × 1 [4-({(1s)-1-[(2,4-Dichlorophenyl)carbamoyl]-1,3- Dihydro-2h-Isoindol-2-Yl}methyl)-2- Methylphenoxy]acetic acid PDB code: 3oz0(A).
		10. Ligand: 401 × 1 (2s)-2-{3-[({[2-Fluoro-4-(Trifluoromethyl) phenyl]carbonyl}amino)methyl]-4- Methoxybenzyl}butanoic acid PDB code: 2znq(A).
		11. Ligand: 433 × 1 2-(4-{3-[1-[2-(2-Chloro-6-Fluoro-Phenyl)-Ethyl]-3-(2, 3-Dichloro-Phenyl)-Ureido]-Propyl}-Phenoxy)- 2-Methyl- Propionic acid PDB code: 1gwx(A).
		12. Ligand: 7SM × 1 6-(2-{[Cyclopropyl(3'-Methoxy[1,1'-Biphenyl]-4- Carbonyl)amino]methyl}phenoxy)hexanoic acid PDB code: 5u42(A).
		13. Ligand: 7SS × 1 6-(2-{[Cyclopropyl(4'-Methoxy[1,1'-Biphenyl]-4- Carbonyl)amino]methyl}phenoxy)hexanoic acid PDB code: 5u43(A).
		14. Ligand: 7SV × 1 6-(2-{[Cyclopropyl(2'-Fluoro[1,1'-Biphenyl]-4- Carbonyl)amino]methyl}phenoxy)hexanoic acid PDB code: 5u44(A).
		15. Ligand: 7SY × 1 6-(2-{[Cyclopropyl(3'-Fluoro[1,1'-Biphenyl]-4- Carbonyl)amino]methyl}phenoxy)hexanoic acid PDB code: 5u45(A).
		16. Ligand: 7T1 × 1 {2-Methyl-4-[({4-Methyl-2-[4-(Trifluoromethyl)phenyl]- 1,3-Thiazol-5- Yl}methyl)sulfanyl]phenoxy}acetic acid PDB code: 5u46(A).
		17. Ligand: 7TV × 1 6-[2-({Cyclopentyl[4-(Furan-2-Yl)benzene-1- Carbonyl]amino}methyl)phenoxy]hexanoic acid PDB code: 5u3u(A).
		18. Ligand: 7TY × 1 6-[2-({Cyclopentyl[4-(Furan-3-Yl)benzene-1- Carbonyl]amino}methyl)phenoxy]hexanoic acid PDB code: 5u3v(A).
		19. Ligand: 7U1 × 1 6-(2-{[([1,1'-Biphenyl]-4-Carbonyl)(cyclopropyl) amino]methyl}phenoxy)hexanoic acid PDB code: 5u3w(A).
		20. Ligand: 7U4 × 1 6-[2-({Cyclopropyl[4-(Pyridin-3-Yl)benzene-1- Carbonyl]amino}methyl)phenoxy]hexanoic acid PDB code: 5u3x(A).
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Cluster 2 contains 9 ligand types

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Ligand		Description
		1. Ligand: B7G × 49 Heptyl beta-D-Glucopyranoside PDB codes: 1y0s(A), 2awh(A), 2b50(A), 2baw(A), 2znp(A), 2znq(A), 3gz9(A), 5u3q(A), 5u3r(A), 5u3s(A), 5u3t(A), 5u3u(A), 5u3v(A), 5u3w(A), 5u3x(A), 5u3y(A), 5u3z(A), 5u40(A), 5u41(A), 5u42(A), 5u43(A), 5u44(A), 5u45(A), 5u46(A),
		2. Ligand: PGO × 10 S-1,2-Propanediol PDB codes: 5u3r(A), 5u3s(A), 5u3t(A), 5u3w(A), 5u3z(A), 5u41(A), 5u46(A).
		3. Ligand: PEG × 6 Di(hydroxyethyl)ether PDB codes: 5u3y(A), 5u3z(A), 5u40(A), 5u41(A).
		4. Ligand: JZR × 3 Hexyl beta-D-Glucopyranoside PDB codes: 3peq(A), 5y7x(A),
		5. Ligand: 1BO × 2 1-Butanol PDB codes: 3et2(A),
		6. Ligand: BOG × 2 Octyl beta-D-Glucopyranoside PDB codes: 2xyw(A), 2xyx(A).
		7. Ligand: PE3 × 2 3,6,9,12,15,18,21,24,27,30,33,36,39- Tridecaoxahentetracontane-1,41-Diol PDB codes: 6a6p(A),
		8. Ligand: WLM × 2 5-Chloro-2-Methoxy-N-[2-[4-[(5-Propan-2-Yl-1,3,4- Thiadiazol-2-Yl)sulfamoyl]phenyl]ethyl]benzamide PDB codes: 2xyj(A),
		9. Ligand: 1PE × 1 Pentaethylene glycol PDB code: 2xyj(A).

Cluster 3 contains 3 ligand types

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Ligand		Description
		1. Ligand: PEG × 7 Di(hydroxyethyl)ether PDB codes: 5u3q(A), 5u3r(A), 5u3t(A), 5u3v(A), 5u3z(A), 5u40(A), 5u43(A).
		2. Ligand: 1BO × 1 1-Butanol PDB code: 3et2(A).
		3. Ligand: PGO × 1 S-1,2-Propanediol PDB code: 5u41(A).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: PEG × 8 Di(hydroxyethyl)ether PDB codes: 5u3s(A), 5u3v(A), 5u3y(A), 5u41(A), 5u42(A), 5u43(A), 5u45(A), 5u46(A).
		2. Ligand: PGO × 1 S-1,2-Propanediol PDB code: 5u3q(A).

Cluster 5 contains 2 ligand types

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Ligand		Description
		1. Ligand: PGO × 3 S-1,2-Propanediol PDB codes: 5u3r(A), 5u3y(A), 5u3z(A).
		2. Ligand: PEG × 1 Di(hydroxyethyl)ether PDB code: 5u3x(A).

Cluster 6 contains 2 ligand types

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Ligand		Description
		1. Ligand: PEG × 1 Di(hydroxyethyl)ether PDB code: 5u41(A).
		2. Ligand: PGO × 1 S-1,2-Propanediol PDB code: 5u40(A).