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Ligand clusters for UniProt code P9WMN3

Ligand clusters for P9WMN3: Bifunctional protein GlmU from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)

6 ligand clusters
Cluster 1.
3 ligand types
3 ligands
Cluster 2.
6 ligand types
18 ligands
Cluster 3.
1 ligand type
3 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
2 ligand types
5 ligands
Representative protein: 3d8vA  
JSmol
 

Structures

PDB   Schematic diagram
3d8vA    
3sptA    
3st8A    
4k6rA    
3foqA    
 more ...

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: ACO × 1
Acetyl coenzyme A
PDB code: 3spt(A).


 
2. Ligand: COA × 1
Coenzyme a
PDB code: 3st8(A).


 
3. Ligand: GP1 × 1
2-Amino-2-Deoxy-1-O-Phosphono-Alpha-D-Glucopyranose
PDB code: 3st8(A).

 

 Cluster 2 contains 6 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 2
PDB codes: 3dj4(A), 3spt(A).


 
2. Ligand: UD1 × 7
Uridine-Diphosphate-N-Acetylglucosamine
PDB codes: 3d8v(A), 3dj4(A), 3spt(A), 3st8(A), 4g3q(A), 4g3s(A), 4g87(A).


 
3. Ligand: GN1 × 3
2-Acetamido-2-Deoxy-1-O-Phosphono-Alpha-D-Glucopyranose
PDB codes: 2qkx(A), 4hcq(A), 4k6r(A).


 
4. Ligand: POP × 3
Pyrophosphate 2-
PDB codes: 4g3q(A), 4g3s(A), 4g87(A).

_Co
 
5. Metal: _CO × 2
PDB codes: 4g3q(A), 4g87(A).


 
6. Ligand: ATP × 1
Adenosine-5'-Triphosphate
PDB code: 4k6r(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GN1 × 3
2-Acetamido-2-Deoxy-1-O-Phosphono-Alpha-D-Glucopyranose
PDB codes: 4g3s(A), 4hcq(A), 4k6r(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 3foq(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 3foq(A).

 

 Cluster 6 contains 2 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 3
PDB codes: 3spt(A), 4g3q(A), 4g87(A).

_Co
 
2. Metal: _CO × 2
PDB codes: 4g3q(A), 4g87(A).

 

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