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EBI
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Ligand clusters for UniProt code P82974
Ligand clusters for P82974: 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD OS=Citrobacter freundii GN=ampD PE=1 SV=1
1 ligand cluster
Cluster 1.
3 ligand types
6 ligands
Representative protein: 2y28A
Structures
PDB
Schematic diagram
2y28
A
2y2b
A
2y2e
A
2y2d
A
Cluster 1 contains 3 ligand types
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Ligand
Description
_Zn
1. Metal:
_ZN × 4
PDB codes:
2y28
(A),
2y2b
(A),
2y2d
(A),
2y2e
(A).
2. Ligand:
AH0 × 1
2-(2-Acetylamino-4-Hydroxy-6,8-Dioxa- Bicyclo[3.2.1]oct-3-Yloxy)-Propionic acid
PDB code:
2y2b
(A).
3. Ligand:
MHI × 1
L-Ala-Gamma-D-Glu-Meso-Diaminopimelic acid
PDB code:
2y2b
(A).