Ligand clusters for UniProt code P81186

Ligand clusters for P81186: Periplasmic nitrate reductase from Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949 / MB)

		6 ligand clusters Cluster 1. 2 ligand types 24 ligands Cluster 2. 3 ligand types 8 ligands Cluster 3. 2 ligand types 2 ligands Cluster 4. 1 ligand type 8 ligands Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 2v45A

Structures

PDB		Schematic diagram
2v45A
2jimA
2v3vA
2jiqA
2jirA
		more ...

Cluster 1 contains 2 ligand types

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Ligand		Description
		1. Ligand: MGD × 16 2-Amino-5,6-Dimercapto-7-Methyl-3,7,8a,9-Tetrahydro-8- Oxa-1,3,9,10-Tetraaza-Anthracen-4- One guanosine dinucleotide PDB codes: 2nap(A), 2jim(A), 2jio(A), 2jip(A), 2jiq(A), 2jir(A), 2v3v(A), 2v45(A),
_Mo		2. Metal: _MO × 8 PDB codes: 2jim(A), 2jio(A), 2jip(A), 2jiq(A), 2jir(A), 2nap(A), 2v3v(A), 2v45(A).

Cluster 2 contains 3 ligand types

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Ligand		Description
		1. Ligand: MES × 1 2-(N-Morpholino)-Ethanesulfonic acid PDB code: 2nap(A).
		2. Ligand: NO3 × 4 Nitrate ion PDB codes: 2jiq(A),
		3. Ligand: LCP × 3 Perchlorate ion PDB codes: 2v3v(A), 2v45(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: LCP × 1 Perchlorate ion PDB code: 2v3v(A).
		2. Ligand: NO3 × 1 Nitrate ion PDB code: 2jiq(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: SF4 × 8 Unknown atom or ion PDB codes: 2jim(A), 2jio(A), 2jip(A), 2jiq(A), 2jir(A), 2nap(A), 2v3v(A), 2v45(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: LCP × 1 Perchlorate ion PDB code: 2v3v(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: NO3 × 1 Nitrate ion PDB code: 2jiq(A).