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Ligand clusters for UniProt code P81180

Ligand clusters for P81180: Cyanovirin-N from Nostoc ellipsosporum

Top 6 (of 9) ligand clusters
Cluster 1.
4 ligand types
4 ligands
Cluster 2.
3 ligand types
3 ligands
Cluster 3.
1 ligand type
3 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3s3zA  
JSmol
 

Structures

PDB   Schematic diagram
3s3zA    
1lomA    
3gxyA    
1l5bA    
3s3yA    
 more ...

 

 Cluster 1 contains 4 ligand types

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Ligand Description


 
1. Ligand: NAG-NAG-BMA-MAN-MAN-MAN-MAN-MAN-MAN-MAN × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose.
PDB code: 3gxz(A).


 
2. Ligand: OPM-MAN-MAN × 1
OPM=Pentyl alpha-D-Mannopyranoside, MAN=Alpha-D-Mannopyranose.
PDB code: 3gxy(A).


 
3. Ligand: PO4 × 1
Phosphate ion
PDB code: 3lhc(A).


 
4. Ligand: SO4 × 1
Sulfate ion
PDB code: 1lom(A).

 

 Cluster 2 contains 3 ligand types

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Ligand Description


 
1. Ligand: BMA-MAN-MAN-MAN × 1
BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose.
PDB code: 3gxz(A).


 
2. Ligand: OPM-MAN-MAN × 1
OPM=Pentyl alpha-D-Mannopyranoside, MAN=Alpha-D-Mannopyranose.
PDB code: 3gxy(A).

_Na
 
3. Metal: _NA × 1
PDB code: 3lhc(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: NHE × 3
2-[N-Cyclohexylamino]ethane sulfonic acid
PDB codes: 1l5b(A), 3gxy(A), 3gxz(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: PO4 × 1
Phosphate ion
PDB code: 3lhc(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: PO4 × 1
Phosphate ion
PDB code: 3lhc(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description

_Na
 
1. Metal: _NA × 1
PDB code: 1l5b(A).

 

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