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Ligand clusters for UniProt code P69441

Ligand clusters for P69441: Adenylate kinase from Escherichia coli (strain K12)

5 ligand clusters
Cluster 1.
7 ligand types
19 ligands
Cluster 2.
1 ligand type
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Representative protein: 1akeA  
JSmol
 

Structures

PDB   Schematic diagram
1akeA    
1e4vA    
2eckA    
3hprA    
3hpqA    
 more ...

 

 Cluster 1 contains 7 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 1
PDB code: 6f7u(A).


 
2. Ligand: AP5 × 9
Bis(adenosine)-5'-Pentaphosphate
PDB codes: 1ake(A), 1e4v(A), 1e4y(A), 3hpq(A), 3hpr(A), 4x8l(A), 4x8o(A), 5eje(A), 6ham(A).


 
3. Ligand: ADP × 3
Adenosine-5'-Diphosphate
PDB codes: 2eck(A), 7apu(A),


 
4. Ligand: AMP × 2
Adenosine monophosphate
PDB codes: 1ank(A), 2eck(A).

_Cl
 
5. Metal: _CL × 2
PDB codes: 6rze(A), 6s36(A).


 
6. Ligand: ANP × 1
Phosphoaminophosphonic acid-Adenylate ester
PDB code: 1ank(A).


 
7. Ligand: GCP × 1
Phosphomethylphosphonic acid guanylate ester
PDB code: 6f7u(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description

_Cl
 
1. Metal: _CL × 2
PDB codes: 6rze(A), 6s36(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description

_Na
 
1. Metal: _NA × 1
PDB code: 6s36(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description

_Cl
 
1. Metal: _CL × 1
PDB code: 6s36(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description

_Mg
 
1. Metal: _MG × 1
PDB code: 6s36(A).

 

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