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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code P56726
Ligand clusters for P56726: Smoothened homolog from Mus musculus
Top 6 (of 8) ligand clusters
Cluster 1.
2 ligand types
2 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
3 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
2 ligands
Representative protein: 6o3cA
Structures
PDB
Schematic diagram
6o3c
A
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
CLR × 1
cholesterol
Cholesterol
PDB code:
6o3c
(A).
2. Ligand:
NAG × 1
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB code:
6o3c
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
LKD × 1
3-Chloro-4,7-Difluoro-N-{[2-Methoxy-5-(Pyridin-4-Yl) phenyl]methyl}-N-[Trans-4-
(Methylamino)cyclohexyl]-1- Benzothiophene-2-Carboxamide
PDB code:
6o3c
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
CLR × 1
cholesterol
Cholesterol
PDB code:
6o3c
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
OLB × 3
(2s)-2,3-Dihydroxypropyl (9z)-Octadec-9-Enoate
PDB codes:
6o3c
(A),
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
OLB × 1
(2s)-2,3-Dihydroxypropyl (9z)-Octadec-9-Enoate
PDB code:
6o3c
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
OLB × 2
(2s)-2,3-Dihydroxypropyl (9z)-Octadec-9-Enoate
PDB codes:
6o3c
(A),