Ligand clusters for UniProt code P55859

Ligand clusters for P55859: Purine nucleoside phosphorylase from Bos taurus

		Top 6 (of 7) ligand clusters Cluster 1. 18 ligand types 29 ligands Cluster 2. 1 ligand type 2 ligands Cluster 3. 1 ligand type 3 ligands Cluster 4. 1 ligand type 6 ligands Cluster 5. 1 ligand type 4 ligands Cluster 6. 1 ligand type 1 ligand
Representative protein: 1a9oA

Structures

PDB		Schematic diagram
1a9oA
1v48A
2qplA
3pnpA
2ai3A
		more ...

Cluster 1 contains 18 ligand types

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Ligand		Description
		1. Ligand: PO4 × 5 Phosphate ion PDB codes: 1a9o(A), 1a9p(A), 1b8n(A), 1b8o(A), 1fxu(A).
		2. Ligand: HPA × 3 Hypoxanthine PDB codes: 1a9q(A), 1a9r(A), 1vfn(A).
		3. Ligand: NOS × 1 Inosine PDB code: 1a9s(A).
		4. Ligand: P2G × 1 (2s,4r,6r,6as)-4-(2-Amino-6-Oxo-1,6-Dihydropurin-9-Yl)- 6-(Hydroxymethyl)-Tetrahydrofuro[3,4- D][1,3]dioxol-2- Ylphosphonic acid PDB code: 2ai3(A).
		5. Ligand: P1G × 1 ((2r,4r,6r,6as)-4-(2-Amino-6-Oxo-1,6-Dihydropurin-9- Yl)-6-(Hydroxymethyl)-Tetrahydrofuro[3,4- D][1, 3]dioxol-2-Yl)methylphosphonic acid PDB code: 2ai1(A).
		6. Ligand: HA1 × 1 9-(5,5-Difluoro-5-Phosphonopentyl)guanine PDB code: 1v48(A).
		7. Ligand: GU7 × 1 2-Amino-7-[2-(2-Hydroxy-1-Hydroxymethyl-Ethylamino)- Ethyl]-1,7-Dihydro-Purin-6-One PDB code: 1fxu(A).
		8. Ligand: 9PP × 2 2,6-Diamino-(S)-9-[2-(Phosphonomethoxy)propyl]purine PDB codes: 1lv8(A), 1lvu(A).
		9. Ligand: IMG × 1 1,4-Dideoxy-1,4-Imino-1-(S)-(9-Deazaguanin-9-Yl)-D- Ribitol PDB code: 1b8n(A).
		10. Ligand: 9DI × 1 9-Deazainosine PDB code: 1a9p(A).
		11. Ligand: IMH × 1 1,4-Dideoxy-4-Aza-1-(S)-(9-Deazahypoxanthin-9-Yl)-D- Ribitol PDB code: 1b8o(A).
		12. Ligand: P1D × 1 ((2s,3as,4r,6s)-4-(Hydroxymethyl)-6-(4-Oxo-4,5-Dihydro- 3h-Pyrrolo[3,2-D]pyrimidin-7-Yl)- Tetrahydrofuro[3,4- D][1,3]dioxol-2-Yl)methylphosphonic acid PDB code: 2ai2(A).
		13. Ligand: PO4 × 2 Phosphate ion PDB codes: 3pnp(A), 4pnp(A).
		14. Ligand: HPA × 1 Hypoxanthine PDB code: 1a9t(A).
		15. Ligand: SO4 × 4 Sulfate ion PDB codes: 1a9q(A), 1a9r(A), 1a9s(A), 2qpl(A).
		16. Ligand: 9D9 × 1 [5-(2-Amino-4-Oxo-4,5-Dihydro-3h-Pyrrolo[3,2- D]pyrimidin-7-Yl)-1,1-Difluoropentyl]phosphonic acid PDB code: 3fuc(A).
		17. Ligand: BTY × 1 4-Amino-7-Methylpyrazolo[1,5-A][1,3,5]triazin-2(1h)- One PDB code: 2qpl(A).
		18. Ligand: R1P × 1 1-O-Phosphono-Alpha-D-Ribofuranose PDB code: 1a9t(A).

Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: 9PP × 2 2,6-Diamino-(S)-9-[2-(Phosphonomethoxy)propyl]purine PDB codes: 1lv8(A), 1lvu(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: 144 × 3 Tris-Hydroxymethyl-Methyl-Ammonium PDB codes: 2ai1(A), 2ai2(A), 2ai3(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
_Zn		1. Metal: _ZN × 6 PDB codes: 1fxu(A), 1v48(A), 1vfn(A), 2ai1(A), 2ai2(A), 2ai3(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
_Ca		1. Metal: _CA × 4 PDB codes: 1lv8(A), 1lvu(A),

Cluster 6 contains 1 ligand type

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Ligand		Description
_Ca		1. Metal: _CA × 1 PDB code: 1lvu(A).