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EBI Databases Structure Databases PDBsum

Ligand clusters for UniProt code P54098

Ligand clusters for P54098: DNA polymerase subunit gamma-1 from Homo sapiens

1 ligand cluster
Cluster 1.
6 ligand types
9 ligands
Representative protein: 4ztuA  
JSmol
 

Structures

PDB   Schematic diagram
4ztuA    
4ztzA    
5c51A    
5c52A    
5c53A    

 

 Cluster 1 contains 6 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 3
PDB codes: 5c51(A), 5c52(A), 5c53(A).


 
2. Ligand: 1RY × 2
[[(2r,5s)-5-(4-Azanyl-5-Fluoranyl-2-Oxidanylidene- Pyrimidin-1-Yl)-1,3-Oxathiolan-2-Yl]methoxy-
Oxidanyl- Phosphoryl] phosphono hydrogen phosphate
PDB codes: 5c51(A), 5c52(A).


 
3. Ligand: 4Y3 × 1
[[(2s,5r)-5-(4-Azanyl-5-Fluoranyl-2-Oxidanylidene- Pyrimidin-1-Yl)oxolan-2-Yl]methoxy-Oxidanyl-
Phosphoryl] phosphono hydrogen phosphate
PDB code: 5c53(A).


 
4. Ligand: DCP × 1
2'-Deoxycytidine-5'-Triphosphate
PDB code: 4ztz(A).


 
5. Ligand: DCT × 1
2',3'-Dideoxycytidine 5'-Triphosphate
PDB code: 4ztu(A).


 
6. Ligand: DOC × 1
2',3'-Dideoxycytidine-5'-Monophosphate
PDB code: 5c53(A).

 

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