Ligand clusters for UniProt code P53610

Ligand clusters for P53610: Geranylgeranyl transferase type-1 subunit beta from Rattus norvegicus

		3 ligand clusters Cluster 1. 15 ligand types 33 ligands Cluster 2. 1 ligand type 1 ligand Cluster 3. 1 ligand type 3 ligands
Representative protein: 1n4pB

Structures

PDB		Schematic diagram
1n4pB
1tnoB
1tnyB
1tnzB
1n4qB
		more ...

Cluster 1 contains 15 ligand types

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Ligand		Description
_Zn		1. Metal: _ZN × 10 PDB codes: 1n4p(B), 1n4q(B), 1n4r(B), 1n4s(B), 1s64(B), 1tnb(B), 1tno(B), 1tnu(B), 1tny(B), 1tnz(B).
		2. Ligand: MGM × 6 2-[Methyl-(5-Geranyl-4-Methyl-Pent-3-Enyl)-Amino]- Ethyl-Diphosphate PDB codes: 1n4q(B), 1tnb(B), 1tno(B), 1tnu(B), 1tny(B), 1tnz(B).
		3. Ligand: GER × 2 Geran-8-Yl geran PDB codes: 1n4r(B), 1n4s(B).
		4. Ligand: GRG × 2 Geranylgeranyl diphosphate PDB codes: 1n4p(B), 1n4s(B).
		5. Ligand: MES × 2 2-(N-Morpholino)-Ethanesulfonic acid PDB codes: 1n4r(B), 1s64(B).
		6. Ligand: SO4 × 2 Sulfate ion PDB codes: 1n4r(B), 1s64(B).
		7. Ligand: 778 × 1 4-[(5-{[4-(3-Chlorophenyl)-3-Oxopiperazin-1- Yl]methyl}-1h-Imidazol-1-Yl)methyl]benzonitrile PDB code: 1s64(B).
		8. Ligand: ARG-CYS-VAL-LEU-LEU × 1 PDB code: 1tnz(B).
		9. Ligand: ASN-CYS-CYS-LYS-VAL-LEU × 1 PDB code: 1tnu(B).
		10. Ligand: CYS-VAL-ILE-LEU × 1 PDB code: 1n4s(B).
		11. Ligand: LYS-CYS-VAL-ILE-LEU × 1 PDB code: 1n4q(B).
		12. Ligand: LYS-CYS-VAL-ILE-PHE × 1 PDB code: 1tnb(B).
		13. Ligand: PHE-CYS-ALA-ILE-LEU × 1 PDB code: 1tny(B).
		14. Ligand: THR-LYS-CYS-VAL-ILE-LEU × 1 PDB code: 1n4r(B).
		15. Ligand: THR-LYS-CYS-VAL-ILE-MET × 1 PDB code: 1tno(B).

Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: MES × 1 2-(N-Morpholino)-Ethanesulfonic acid PDB code: 1tno(B).

Cluster 3 contains 1 ligand type

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Ligand		Description
_Cl		1. Metal: _CL × 3 PDB codes: 1n4p(B), 1n4s(B), 1tny(B).