Ligand clusters for UniProt code P53590

Ligand clusters for P53590: Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial (Fragment) from Sus scrofa

		Top 6 (of 12) ligand clusters Cluster 1. 7 ligand types 13 ligands Cluster 2. 5 ligand types 9 ligands Cluster 3. 1 ligand type 1 ligand Cluster 4. 3 ligand types 7 ligands Cluster 5. 2 ligand types 3 ligands Cluster 6. 1 ligand type 3 ligands
Representative protein: 1eudB

Structures

PDB		Schematic diagram
1eudB
1eucB
4xx0B
6xruB
5caeB
		more ...

Cluster 1 contains 7 ligand types

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Ligand		Description
		1. Ligand: GDP × 1 Guanosine-5'-Diphosphate PDB code: 2fpg(B).
		2. Ligand: GTP × 1 Guanosine-5'-Triphosphate PDB code: 2fp4(B).
__K		3. Metal: __K × 2 PDB codes: 2fp4(B), 2fpg(B).
		4. Ligand: SO4 × 5 Sulfate ion PDB codes: 1euc(B), 1eud(B), 2fpi(B), 2fpp(B), 4xx0(B).
		5. Ligand: GDP × 2 Guanosine-5'-Diphosphate PDB codes: 7jfp(B), 7jmk(B).
		6. Ligand: GCP × 1 Phosphomethylphosphonic acid guanylate ester PDB code: 7jj0(B).
		7. Ligand: GNP × 1 Phosphoaminophosphonic acid-Guanylate ester PDB code: 7jkr(B).

Cluster 2 contains 5 ligand types

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Ligand		Description
		1. Ligand: PO4 × 2 Phosphate ion PDB codes: 1euc(B), 2fpg(B).
		2. Ligand: SIN × 2 succinic acid Succinic acid PDB codes: 5cae(B), 6xru(B).
		3. Ligand: PO4 × 3 Phosphate ion PDB codes: 4xx0(B), 5cae(B), 6xru(B).
		4. Ligand: COA × 1 Coenzyme a PDB code: 5cae(B).
		5. Ligand: DCA × 1 Desulfo-Coenzyme a PDB code: 6xru(B).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: GTP × 1 Guanosine-5'-Triphosphate PDB code: 2fp4(B).

Cluster 4 contains 3 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 7jfp(B).
		2. Ligand: SIN × 1 succinic acid Succinic acid PDB code: 6xru(B).
		3. Ligand: SO4 × 5 Sulfate ion PDB codes: 1euc(B), 1eud(B), 2fpi(B), 4xx0(B),

Cluster 5 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 2 glycerin Glycerol PDB codes: 4xx0(B), 7jfp(B).
		2. Ligand: SO4 × 1 Sulfate ion PDB code: 2fpp(B).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 3 glycerin Glycerol PDB codes: 4xx0(B), 5cae(B), 6xru(B).