Ligand clusters for UniProt code P49917

Ligand clusters for P49917: DNA ligase 4 from Homo sapiens

		Top 6 (of 30) ligand clusters Cluster 1. 2 ligand types 3 ligands Cluster 2. 3 ligand types 10 ligands Cluster 3. 2 ligand types 4 ligands Cluster 4. 2 ligand types 2 ligands Cluster 5. 2 ligand types 4 ligands Cluster 6. 1 ligand type 3 ligands
Representative protein: 6bkgA

Structures

PDB		Schematic diagram
6bkgA
6bkfA
3w1bA
3w1gA
3w5oA
		more ...

Cluster 1 contains 2 ligand types

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Ligand		Description
		1. Ligand: VAL-PRO-GLN-TRP-GLU-VAL-PHE-PHE-LYS-ARG × 2 PDB codes: 3w1b(A), 3w1g(A).
		2. Ligand: ASP-VAL-PRO-GLN-TRP-GLU-VAL-PHE-PHE-LYS × 1 PDB code: 4htp(A).

Cluster 2 contains 3 ligand types

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Ligand		Description
		1. Ligand: SO4 × 5 Sulfate ion PDB codes: 3w1b(A), 3w1g(A), 3w5o(A).
		2. Ligand: AMP × 3 Adenosine monophosphate PDB codes: 3w1b(A), 6bkf(A), 6bkg(A).
		3. Ligand: ATP × 2 Adenosine-5'-Triphosphate PDB codes: 3w1g(A), 3w5o(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: SO4 × 3 Sulfate ion PDB codes: 3w1b(A), 3w1g(A), 3w5o(A).
		2. Ligand: PO4 × 1 Phosphate ion PDB code: 4hto(A).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: PO4 × 1 Phosphate ion PDB code: 4hto(A).
		2. Ligand: SO4 × 1 Sulfate ion PDB code: 3w1b(A).

Cluster 5 contains 2 ligand types

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Ligand		Description
		1. Ligand: SO4 × 2 Sulfate ion PDB codes: 3w1g(A), 3w5o(A).
_Hg		2. Metal: _HG × 2 PDB codes: 3w1b(A),

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 3 Sulfate ion PDB codes: 3w1b(A), 3w1g(A), 3w5o(A).