Ligand clusters for UniProt code P49642

Ligand clusters for P49642: DNA primase small subunit from Homo sapiens

		Top 6 (of 17) ligand clusters Cluster 1. 9 ligand types 22 ligands Cluster 2. 1 ligand type 1 ligand Cluster 3. 1 ligand type 1 ligand Cluster 4. 2 ligand types 5 ligands Cluster 5. 2 ligand types 5 ligands Cluster 6. 1 ligand type 1 ligand
Representative protein: 4mhqA

Structures

PDB		Schematic diagram
4mhqA
6rb4A
4lilA
4bpxA
4bpuA
		more ...

Cluster 1 contains 9 ligand types

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Ligand		Description
_Mn		1. Metal: _MN × 11 PDB codes: 4lil(A), 6r4s(A), 6r4t(A), 6r4u(A), 6r5d(A), 6r5e(A),
		2. Ligand: CIT × 2 citric acid Citric acid PDB codes: 4lik(A), 4mhq(A).
_Mg		3. Metal: _MG × 2 PDB codes: 4bpw(A),
		4. Ligand: UTP × 2 Uridine 5'-Triphosphate PDB codes: 4bpw(A), 4lil(A).
		5. Ligand: ATP × 1 Adenosine-5'-Triphosphate PDB code: 6r4s(A).
		6. Ligand: DTP × 1 2'-Deoxyadenosine 5'-Triphosphate PDB code: 6r5d(A).
		7. Ligand: HEJ × 1 9-{5-O-[(S)-Hydroxy{[(r)-Hydroxy(phosphonooxy) phosphoryl]oxy}phosphoryl]-Beta-D-Arabinofuranosyl}- 9h-Purin-6-Amine PDB code: 6r4t(A).
		8. Ligand: HFD × 1 2-Fluoro-9-{5-O-[(R)-Hydroxy{[(r)- Hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-Beta- D- Arabinofuranosyl}-9h-Purin-6-Amine PDB code: 6r4u(A).
		9. Ligand: JSQ × 1 2-Fluoro-Atp PDB code: 6r5e(A).

Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: CIT × 1 citric acid Citric acid PDB code: 4lik(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: CIT × 1 citric acid Citric acid PDB code: 4lik(A).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 4bpu(A).
		2. Ligand: EDO × 4 1,2-Ethanediol PDB codes: 6r4t(A), 6r5d(A), 6r5e(A), 6rb4(A).

Cluster 5 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 4bpu(A).
		2. Ligand: EDO × 4 1,2-Ethanediol PDB codes: 6r5d(A), 6r5e(A), 6rb4(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 4bpu(A).