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Ligand clusters for UniProt code P49366

Ligand clusters for P49366: Deoxyhypusine synthase from Homo sapiens

Top 6 (of 38) ligand clusters
Cluster 1.
10 ligand types
51 ligands
Cluster 2.
3 ligand types
3 ligands
Cluster 3.
3 ligand types
3 ligands
Cluster 4.
2 ligand types
4 ligands
Cluster 5.
3 ligand types
6 ligands
Cluster 6.
2 ligand types
2 ligands
Representative protein: 6xxjA  
JSmol
 

Structures

PDB   Schematic diagram
6xxjA    
6xxmA    
6xxkA    
6xxhA    
6xxmB    
 more ...

 

 Cluster 1 contains 10 ligand types

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Ligand Description


 
1. Ligand: NAD × 4
Nicotinamide-Adenine-Dinucleotide
PDB codes: 1dhs(A), 1rlz(A), 1roz(A), 1rqd(A).


 
2. Ligand: GC7 × 1
1-Guanidinium-7-Aminoheptane
PDB code: 1rqd(A).


 
3. Ligand: NAD × 8
Nicotinamide-Adenine-Dinucleotide
PDB codes: 6p4v(A), 6xxi(A), 6xxj(A),


 
4. Ligand: EDO × 10
1,2-Ethanediol
PDB codes: 6xxi(A), 6xxk(A), 6xxl(A),


 
5. Ligand: SPD × 8
Spermidine
PDB codes: 6xxj(A), 6xxk(A),


 
6. Ligand: BME × 7
Beta-Mercaptoethanol
PDB codes: 6xxh(A), 6xxi(A), 6xxj(A), 6xxk(A),


 
7. Ligand: ACT × 5
Acetate ion
PDB codes: 6xxk(A), 6xxl(A).


 
8. Ligand: PUT × 4
1,4-Diaminobutane
PDB codes: 6xxm(A),


 
9. Ligand: GC7 × 2
1-Guanidinium-7-Aminoheptane
PDB codes: 6p4v(A),


 
10. Ligand: SPM × 2
Spermine
PDB codes: 6xxl(A),

 

 Cluster 2 contains 3 ligand types

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Ligand Description


 
1. Ligand: 8XY × 1
6-Bromo-N-(1h-Indol-4-Yl)-1-Benzothiophene-2- Carboxamide
PDB code: 6pgr(A).


 
2. Ligand: 8Y1 × 1
6-[(1r)-2-Amino-1-Phenylethyl]-3-(Pyridin-3-Yl)-5,6- Dihydrothieno[2,3-C]pyridin-7(4h)-One
PDB code: 6wkz(A).


 
3. Ligand: 91A × 1
6-[(2r)-1-Amino-4-Methylpentan-2-Yl]-3-(Pyridin-3-Yl)- 5,6-Dihydrothieno[2,3-C]pyridin-7(4h)-One
PDB code: 6wl6(A).

 

 Cluster 3 contains 3 ligand types

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Ligand Description


 
1. Ligand: 8XY × 1
6-Bromo-N-(1h-Indol-4-Yl)-1-Benzothiophene-2- Carboxamide
PDB code: 6pgr(A).


 
2. Ligand: 8Y1 × 1
6-[(1r)-2-Amino-1-Phenylethyl]-3-(Pyridin-3-Yl)-5,6- Dihydrothieno[2,3-C]pyridin-7(4h)-One
PDB code: 6wkz(A).


 
3. Ligand: 91A × 1
6-[(2r)-1-Amino-4-Methylpentan-2-Yl]-3-(Pyridin-3-Yl)- 5,6-Dihydrothieno[2,3-C]pyridin-7(4h)-One
PDB code: 6wl6(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: MPD × 2
(4s)-2-Methyl-2,4-Pentanediol
PDB codes: 6p4v(A), 6xxm(B).


 
2. Ligand: MRD × 2
(4r)-2-Methylpentane-2,4-Diol
PDB codes: 6xxj(B), 6xxk(B).

 

 Cluster 5 contains 3 ligand types

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Ligand Description


 
1. Ligand: ACT × 3
Acetate ion
PDB codes: 6xxi(A), 6xxj(B), 6xxk(B).


 
2. Ligand: BME × 2
Beta-Mercaptoethanol
PDB codes: 6xxj(A), 6xxk(A).


 
3. Ligand: OXM × 1
Oxamic acid
PDB code: 6xxl(A).

 

 Cluster 6 contains 2 ligand types

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Ligand Description


 
1. Ligand: ACT × 1
Acetate ion
PDB code: 6xxj(B).


 
2. Ligand: PGE × 1
Triethylene glycol
PDB code: 6xxj(B).

 

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