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EBI
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PDBsum
Ligand clusters for UniProt code P49366
Ligand clusters for P49366: Deoxyhypusine synthase from Homo sapiens
Top 6 (of 38) ligand clusters
Cluster 1.
10 ligand types
51 ligands
Cluster 2.
3 ligand types
3 ligands
Cluster 3.
3 ligand types
3 ligands
Cluster 4.
2 ligand types
4 ligands
Cluster 5.
3 ligand types
6 ligands
Cluster 6.
2 ligand types
2 ligands
Representative protein: 6xxjA
Structures
PDB
Schematic diagram
6xxj
A
6xxm
A
6xxk
A
6xxh
A
6xxm
B
more ...
Cluster 1 contains 10 ligand types
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Ligand
Description
1. Ligand:
NAD × 4
Nicotinamide-Adenine-Dinucleotide
PDB codes:
1dhs
(A),
1rlz
(A),
1roz
(A),
1rqd
(A).
2. Ligand:
GC7 × 1
1-Guanidinium-7-Aminoheptane
PDB code:
1rqd
(A).
3. Ligand:
NAD × 8
Nicotinamide-Adenine-Dinucleotide
PDB codes:
6p4v
(A),
6xxi
(A),
6xxj
(A),
4. Ligand:
EDO × 10
1,2-Ethanediol
PDB codes:
6xxi
(A),
6xxk
(A),
6xxl
(A),
5. Ligand:
SPD × 8
Spermidine
PDB codes:
6xxj
(A),
6xxk
(A),
6. Ligand:
BME × 7
Beta-Mercaptoethanol
PDB codes:
6xxh
(A),
6xxi
(A),
6xxj
(A),
6xxk
(A),
7. Ligand:
ACT × 5
Acetate ion
PDB codes:
6xxk
(A),
6xxl
(A).
8. Ligand:
PUT × 4
1,4-Diaminobutane
PDB codes:
6xxm
(A),
9. Ligand:
GC7 × 2
1-Guanidinium-7-Aminoheptane
PDB codes:
6p4v
(A),
10. Ligand:
SPM × 2
Spermine
PDB codes:
6xxl
(A),
Cluster 2 contains 3 ligand types
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Ligand
Description
1. Ligand:
8XY × 1
6-Bromo-N-(1h-Indol-4-Yl)-1-Benzothiophene-2- Carboxamide
PDB code:
6pgr
(A).
2. Ligand:
8Y1 × 1
6-[(1r)-2-Amino-1-Phenylethyl]-3-(Pyridin-3-Yl)-5,6- Dihydrothieno[2,3-C]pyridin-7(4h)-One
PDB code:
6wkz
(A).
3. Ligand:
91A × 1
6-[(2r)-1-Amino-4-Methylpentan-2-Yl]-3-(Pyridin-3-Yl)- 5,6-Dihydrothieno[2,3-C]pyridin-7(4h)-One
PDB code:
6wl6
(A).
Cluster 3 contains 3 ligand types
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Ligand
Description
1. Ligand:
8XY × 1
6-Bromo-N-(1h-Indol-4-Yl)-1-Benzothiophene-2- Carboxamide
PDB code:
6pgr
(A).
2. Ligand:
8Y1 × 1
6-[(1r)-2-Amino-1-Phenylethyl]-3-(Pyridin-3-Yl)-5,6- Dihydrothieno[2,3-C]pyridin-7(4h)-One
PDB code:
6wkz
(A).
3. Ligand:
91A × 1
6-[(2r)-1-Amino-4-Methylpentan-2-Yl]-3-(Pyridin-3-Yl)- 5,6-Dihydrothieno[2,3-C]pyridin-7(4h)-One
PDB code:
6wl6
(A).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
MPD × 2
(4s)-2-Methyl-2,4-Pentanediol
PDB codes:
6p4v
(A),
6xxm
(B).
2. Ligand:
MRD × 2
(4r)-2-Methylpentane-2,4-Diol
PDB codes:
6xxj
(B),
6xxk
(B).
Cluster 5 contains 3 ligand types
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Ligand
Description
1. Ligand:
ACT × 3
Acetate ion
PDB codes:
6xxi
(A),
6xxj
(B),
6xxk
(B).
2. Ligand:
BME × 2
Beta-Mercaptoethanol
PDB codes:
6xxj
(A),
6xxk
(A).
3. Ligand:
OXM × 1
Oxamic acid
PDB code:
6xxl
(A).
Cluster 6 contains 2 ligand types
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Ligand
Description
1. Ligand:
ACT × 1
Acetate ion
PDB code:
6xxj
(B).
2. Ligand:
PGE × 1
Triethylene glycol
PDB code:
6xxj
(B).