Ligand clusters for UniProt code P46925

Ligand clusters for P46925: Plasmepsin-2 OS=Plasmodium falciparum PE=1 SV=1

		Top 6 (of 8) ligand clusters Cluster 1. 18 ligand types 23 ligands Cluster 2. 3 ligand types 4 ligands Cluster 3. 1 ligand type 1 ligand Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 1pfzA

Structures

PDB		Schematic diagram
1pfzA
2igxA
4ckuA
2igyA
4z22A
		more ...

Cluster 1 contains 18 ligand types

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Ligand		Description
		1. Ligand: GOL × 2 glycerin Glycerol PDB codes: 1pfz(A),
		2. Ligand: IVA-VAL-VAL-STA-ALA-STA × 4 IVA=Isovaleric acid, STA=Statine. PDB codes: 1m43(A), 1sme(A), 1w6i(A), 1xdh(A).
		3. Ligand: IH4 × 2 N-(R-Carboxy-Ethyl)-Alpha-(S)-(2-Phenylethyl) PDB codes: 2bju(A),
		4. Ligand: 48Q × 1 ~{N}1-[(~{Z},3~{r})-4-[2-(3-Methoxyphenyl)propan-2- Ylamino]-3-Oxidanyl-1-Phenyl-But-1-En-2-Yl]-5- Piperidin-1-Yl-~{N}3,~{N}3-Dipropyl-Benzene-1,3- Dicarboxamide PDB code: 4y6m(A).
		5. Ligand: 49W × 1 N'-[(2s,3s)-3-Hydroxy-1-Phenyl-4-{[2-(Pyridin-2-Yl) propan-2-Yl]amino}butan-2-Yl]-N,N-Dipropyl-5- (Pyridin- 1(2h)-Yl)benzene-1,3-Dicarboxamide PDB code: 4ya8(A).
		6. Ligand: 4KG × 1 2-Amino-7-Phenyl-3-{[(2r,5s)-5-Phenyltetrahydrofuran-2- Yl]methyl}quinazolin-4(3h)-One PDB code: 4z22(A).
		7. Ligand: 5FE × 1 5,5,5-Trifluoro-3-Hydroxy-4-[2-(5,5,5-Trifluoro-3- Hydroxy-4-{3-Methyl-2-[3-Methyl-2-(3-Methyl- Butyrylamino)-Butyrylamino]-Butyrylamino}- Pentanoylamino)-Propionylamino]- Pentanoic acid methyl ester PDB code: 1xe5(A).
		8. Ligand: 5FP × 1 5,5,5-Trifluoro-3-Hydroxy-4-[2-(5,5,5-Trifluoro-3- Hydroxy-4-{3-Methyl-2-[3-Methyl-2-(3-Methyl- Butyrylamino)-Butyrylamino]-Butyrylamino}- Pentanoylamino)-Propionylamino]-Pentanoic acid PDB code: 1xe6(A).
		9. Ligand: A1T × 1 5-Pentyl-N-{[4'-(Piperidin-1-Ylcarbonyl)biphenyl-4- Yl]methyl}-N-[1-(Pyridin-2-Ylmethyl)piperidin- 4- Yl]pyridine-2-Carboxamide PDB code: 2igx(A).
		10. Ligand: A2T × 1 N-[1-(3-Methylbutyl)piperidin-4-Yl]-N-{4- [Methyl(pyridin-4-Yl)amino]benzyl}-4-Pentylbenzamide PDB code: 2igy(A).
		11. Ligand: BSU × 1 1,3-Diphenylurea PDB code: 1j8j(A).
		12. Ligand: EH5 × 1 N-(1-Benzyl-3-{[3-(1,3-Dioxo-1,3-Dihydro-Isoindol-2- Yl)-Propionyl]-[2-(Hexahydro-Benzo[1,3]dioxol- 5-Yl)- Ethyl]-Amino}-2-Hydroxy-Propyl)-4-Benzyloxy-3,5- Dimethoxy-Benzamide PDB code: 1lf3(A).
		13. Ligand: IVS × 1 3-Hydroxy-6-Methyl-4-(3-Methyl-2-(3-Methyl-2-(3-Methyl- Butyrylamino)-Butyrylamino)-Butyrylamino)- Heptanoic acid ethyl ester PDB code: 1me6(A).
		14. Ligand: LYS-PRO-PHE-SER-DCL-LEU-GLN-PHE × 1 DCL=2-Amino-4-Methyl-Pentan-1-Ol. PDB code: 2r9b(A).
		15. Ligand: P2F × 1 5-[1,1-Bis(oxidanylidene)-1,2-Thiazinan-2-Yl]-N3-[(2s, 3r)-4-[2-(3-Methoxyphenyl)propan-2-Ylamino]- 3- Oxidanyl-1-Phenyl-Butan-2-Yl]-N1,N1-Dipropyl-Benzene- 1,3-Dicarboxamide PDB code: 4cku(A).
		16. Ligand: R36 × 1 4-Amino-N-{4-[2-(2,6-Dimethyl-Phenoxy)-Acetylamino]-3- Hydroxy-1-Isobutyl-5-Phenyl-Pentyl}- Benzamide PDB code: 1lee(A).
		17. Ligand: R37 × 1 3-Amino-N-{4-[2-(2,6-Dimethyl-Phenoxy)-Acetylamino]-3- Hydroxy-1-Isobutyl-5-Phenyl-Pentyl}- Benzamide PDB code: 1lf2(A).
		18. Ligand: TIT × 1 N-((3s,4s)-5-[(4-Bromobenzyl)oxy]-3-Hydroxy-4-{[N- (Pyridin-2-Ylcarbonyl)-L-Valyl]amino}pentanoyl)- L- Alanyl-L-Leucinamide PDB code: 1w6h(A).

Cluster 2 contains 3 ligand types

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Ligand		Description
		1. Ligand: IVA-VAL-VAL-STA-ALA-STA × 2 IVA=Isovaleric acid, STA=Statine. PDB codes: 1m43(A), 1xdh(A).
		2. Ligand: 5FE × 1 5,5,5-Trifluoro-3-Hydroxy-4-[2-(5,5,5-Trifluoro-3- Hydroxy-4-{3-Methyl-2-[3-Methyl-2-(3-Methyl- Butyrylamino)-Butyrylamino]-Butyrylamino}- Pentanoylamino)-Propionylamino]- Pentanoic acid methyl ester PDB code: 1xe5(A).
		3. Ligand: 5FP × 1 5,5,5-Trifluoro-3-Hydroxy-4-[2-(5,5,5-Trifluoro-3- Hydroxy-4-{3-Methyl-2-[3-Methyl-2-(3-Methyl- Butyrylamino)-Butyrylamino]-Butyrylamino}- Pentanoylamino)-Propionylamino]-Pentanoic acid PDB code: 1xe6(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: LYS-PRO-PHE-SER-DCL-LEU-GLN-PHE × 1 DCL=2-Amino-4-Methyl-Pentan-1-Ol. PDB code: 2r9b(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: 48Q × 1 ~{N}1-[(~{Z},3~{r})-4-[2-(3-Methoxyphenyl)propan-2- Ylamino]-3-Oxidanyl-1-Phenyl-But-1-En-2-Yl]-5- Piperidin-1-Yl-~{N}3,~{N}3-Dipropyl-Benzene-1,3- Dicarboxamide PDB code: 4y6m(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: OPQ × 1 ((3s,4s)-4-((2s,3s)-2-(2-(Napthalen-6-Yl) acetamido)-3-Methylpentanamido)-N-Butyl-3- Hydroxy-6- Methylheptanamide) PDB code: 2bl3(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 1pfz(A).