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Ligand clusters for UniProt code P41250
Ligand clusters for P41250: Glycine--tRNA ligase from Homo sapiens
5 ligand clusters
Cluster 1.
9 ligand types
12 ligands
Cluster 2.
2 ligand types
3 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Representative protein: 4kqeA
Structures
PDB
Schematic diagram
4kqe
A
2q5i
A
2pmf
A
2zxf
A
2zt7
A
more ...
Cluster 1 contains 9 ligand types
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Ligand
Description
1. Ligand:
GLY × 2
glycine
PDB codes:
2zt7
(A),
4kr3
(A).
2. Ligand:
AMP × 2
Adenosine monophosphate
PDB codes:
4kr2
(A),
4qei
(A).
3. Ligand:
B4P × 2
Bis(adenosine)-5'-Tetraphosphate
PDB codes:
2zt5
(A),
2zxf
(A).
4. Ligand:
ANP × 1
Phosphoaminophosphonic acid-Adenylate ester
PDB code:
4kr3
(A).
5. Ligand:
APC × 1
Diphosphomethylphosphonic acid adenosyl ester
PDB code:
2zt6
(A).
6. Ligand:
ATP × 1
Adenosine-5'-Triphosphate
PDB code:
2zt7
(A).
7. Ligand:
DRV × 1
[(2s,3r,4r,5r)-5-(6-Amino-9h-Purin-9-Yl)-3,4- Dihydroxytetrahydrofuran-2-
Yl]methyl (aminoacetyl) sulfamate
PDB code:
2zt8
(A).
8. Ligand:
GAP × 1
Glycyl-Adenosine-5'-Phosphate
PDB code:
5e6m
(A).
_Cl
9. Metal:
_CL × 1
PDB code:
2pmf
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
2pmf
(A),
4kqe
(A).
2. Ligand:
SO4 × 1
Sulfate ion
PDB code:
2q5i
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
2q5i
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
2q5i
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
5e6m
(A).