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Ligand clusters for UniProt code P31644

Ligand clusters for P31644: Gamma-aminobutyric acid receptor subunit alpha-5 from Homo sapiens

6 ligand clusters
Cluster 1.
3 ligand types
3 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 6a96A  
JSmol
 

Structures

PDB   Schematic diagram
6a96A    
5ojmA    
5o8fA    

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: NAG-NAG × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose.
PDB code: 6a96(A).


 
2. Ligand: NAG-NAG-BMA-MAN-MAN × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose.
PDB code: 5ojm(A).


 
3. Ligand: NAG-NAG-BMA-MAN-MAN-MAN-MAN × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose.
PDB code: 5o8f(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: NAG-NAG-BMA-MAN-MAN × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose.
PDB code: 6a96(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: P9N × 1
Pregnanolone
PDB code: 5o8f(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: P9N × 1
Pregnanolone
PDB code: 5o8f(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: NAG × 2
n-acetylglucosamine
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
PDB codes: 5o8f(A), 5ojm(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: ABU × 1
gamma-aminobutyric acid
Gamma-Amino-Butanoic acid
PDB code: 6a96(A).

 

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