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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code P31025
Ligand clusters for P31025: Lipocalin-1 from Homo sapiens
6 ligand clusters
Cluster 1.
2 ligand types
3 ligands
Cluster 2.
3 ligand types
4 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3eycA
Structures
PDB
Schematic diagram
3eyc
A
4qaf
B
4qaf
A
1xki
A
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
OMA × 2
10-{(1r,2r)-2-[(2e)-Hex-2-En-1-Yl]cyclopropyl}decanoic acid
PDB codes:
4qaf
(A),
2. Ligand:
BU1 × 1
1,4-Butanediol
PDB code:
3eyc
(A).
Cluster 2 contains 3 ligand types
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Ligand
Description
_Zn
1. Metal:
_ZN × 1
PDB code:
1xki
(A).
_Cl
2. Metal:
_CL × 2
PDB codes:
1xki
(A),
3. Ligand:
SO4 × 1
Sulfate ion
PDB code:
4qaf
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
4qaf
(A),
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
ACT × 1
Acetate ion
PDB code:
4qaf
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
_Zn
1. Metal:
_ZN × 1
PDB code:
1xki
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
_Zn
1. Metal:
_ZN × 1
PDB code:
1xki
(A).