Ligand clusters for UniProt code P29957

Ligand clusters for P29957: Alpha-amylase from Pseudoalteromonas haloplanktis

		3 ligand clusters Cluster 1. 5 ligand types 7 ligands Cluster 2. 2 ligand types 2 ligands Cluster 3. 1 ligand type 3 ligands
Representative protein: 1aqmA

Structures

PDB		Schematic diagram
1aqmA
1jd7A
1l0pA
1g9hA
1kxhA
		more ...

Cluster 1 contains 5 ligand types

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Ligand		Description
		1. Ligand: TRS × 3 tromethamine 2-Amino-2-Hydroxymethyl-Propane-1,3-Diol PDB codes: 1aqm(A), 1g94(A), 1g9h(A).
		2. Ligand: BGC-DAF × 1 BGC=Beta-D-Glucopyranose, DAF=4,6-Dideoxy-4-{[(1s,5r,6s)-3-Formyl-5,6-Dihydroxy-4- Oxocyclohex-2-En-1-Yl]amino}-Alpha-D-Xylo-Hex- 5- Enopyranose. PDB code: 1g9h(A).
		3. Ligand: GLC-DAF × 1 GLC=Alpha-D-Glucopyranose, DAF=4,6-Dideoxy-4-{[(1s,5r,6s)-3-Formyl-5,6-Dihydroxy-4- Oxocyclohex-2-En-1-Yl]amino}-Alpha-D-Xylo-Hex- 5- Enopyranose. PDB code: 1g94(A).
		4. Ligand: GLC-GLC-AC1 × 1 GLC=Alpha-D-Glucopyranose, AC1=4,6-Dideoxy-4-{[(1s,4r,5s,6s)-4,5,6-Trihydroxy-3- (Hydroxymethyl)cyclohex-2-En-1-Yl]amino}-Alpha-D- Glucopyranose. PDB code: 1kxh(A).
		5. Ligand: GLC-GLC-DAF × 1 GLC=Alpha-D-Glucopyranose, DAF=4,6-Dideoxy-4-{[(1s,5r,6s)-3-Formyl-5,6-Dihydroxy-4- Oxocyclohex-2-En-1-Yl]amino}-Alpha-D-Xylo-Hex- 5- Enopyranose. PDB code: 1g94(A).

Cluster 2 contains 2 ligand types

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Ligand		Description
		1. Ligand: NO3 × 1 Nitrate ion PDB code: 1l0p(A).
_Cl		2. Metal: _CL × 1 PDB code: 1jd7(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
_Ca		1. Metal: _CA × 3 PDB codes: 1jd7(A), 1jd9(A), 1l0p(A).