Ligand clusters for UniProt code P24228

Ligand clusters for P24228: D-alanyl-D-alanine carboxypeptidase DacB from Escherichia coli (strain K12)

		2 ligand clusters Cluster 1. 5 ligand types 5 ligands Cluster 2. 1 ligand type 5 ligands
Representative protein: 2ex2A

Structures

PDB		Schematic diagram
2ex2A
2ex8A
2ex6A
2ex9A
2exbA
		more ...

Cluster 1 contains 5 ligand types

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Ligand		Description
		1. Ligand: 35P × 1 (2r,4s)-5,5-Dimethyl-2-{(1r)-2-Oxo-1-[(Phenoxyacetyl) amino]ethyl}-1,3-Thiazolidine-4- Carboxylic acid PDB code: 2ex9(A).
		2. Ligand: AIX × 1 (2r,4s)-2-[(1r)-1-{[(2r)-2-Amino-2-Phenylacetyl]amino}- 2-Oxoethyl]-5,5-Dimethyl-1,3-Thiazolidine- 4-Carboxylic acid PDB code: 2ex6(A).
		3. Ligand: DGF × 1 (2r,5r)-2-[(2s,3r)-3-Hydroxy-1-Oxobutan-2-Yl]-5-[(2r)- Tetrahydrofuran-2-Yl]-2,5-Dihydro-1,3- Thiazole-4- Carboxylic acid PDB code: 2exa(A).
		4. Ligand: FXM × 1 2,2-Dimethylpropanoyloxymethyl (2r)-5- (Aminocarbonyloxymethyl)-2-[(1r)-1-[[(Z)-2-(2-Azanyl- 1,3- Thiazol-4-Yl)pent-2-Enoyl]amino]-2-Oxidanylidene- Ethyl]-3,6-Dihydro-2h-1,3-Thiazine-4-Carboxylate PDB code: 2exb(A).
		5. Ligand: PNM × 1 Open form - Penicillin g PDB code: 2ex8(A).

Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 5 glycerin Glycerol PDB codes: 2ex2(A), 2ex6(A), 2ex9(A), 2exa(A), 2exb(A).