Ligand clusters for UniProt code P23254

Ligand clusters for P23254: Transketolase 1 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

		2 ligand clusters Cluster 1. 7 ligand types 14 ligands Cluster 2. 6 ligand types 8 ligands
Representative protein: 1ay0A

Structures

PDB		Schematic diagram
1ay0A
1gpuA
1trkA
1tkcA
1ngsA
		more ...

Cluster 1 contains 7 ligand types

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Ligand		Description
		1. Ligand: TPP × 3 Thiamine diphosphate PDB codes: 1ay0(A), 1ngs(A), 1trk(A).
		2. Ligand: E4P × 1 Erythose-4-Phosphate PDB code: 1ngs(A).
		3. Ligand: M6T × 1 6'-Methyl-Thiamin diphosphate PDB code: 1tkc(A).
		4. Ligand: N1T × 1 1'-Deazo-Thiamin diphosphate PDB code: 1tkb(A).
		5. Ligand: N3T × 1 3'-Deazo-Thiamin diphosphate PDB code: 1tka(A).
		6. Ligand: THD × 1 2-[3-[(4-Amino-2-Methyl-5-Pyrimidinyl)methyl]-2-(1,2- Dihydroxyethyl)-4-Methyl-1,3-Thiazol-3-Ium-5- Yl]ethyl trihydrogen diphosphate PDB code: 1gpu(A).
_Ca		7. Metal: _CA × 6 PDB codes: 1gpu(A), 1ngs(A), 1tka(A), 1tkb(A), 1tkc(A), 1trk(A).

Cluster 2 contains 6 ligand types

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Ligand		Description
		1. Ligand: TPP × 3 Thiamine diphosphate PDB codes: 1ay0(A), 1ngs(A), 1trk(A).
		2. Ligand: E4P × 1 Erythose-4-Phosphate PDB code: 1ngs(A).
		3. Ligand: M6T × 1 6'-Methyl-Thiamin diphosphate PDB code: 1tkc(A).
		4. Ligand: N1T × 1 1'-Deazo-Thiamin diphosphate PDB code: 1tkb(A).
		5. Ligand: N3T × 1 3'-Deazo-Thiamin diphosphate PDB code: 1tka(A).
		6. Ligand: THD × 1 2-[3-[(4-Amino-2-Methyl-5-Pyrimidinyl)methyl]-2-(1,2- Dihydroxyethyl)-4-Methyl-1,3-Thiazol-3-Ium-5- Yl]ethyl trihydrogen diphosphate PDB code: 1gpu(A).