Ligand clusters for UniProt code P17405

Ligand clusters for P17405: Sphingomyelin phosphodiesterase from Homo sapiens

		Top 6 (of 20) ligand clusters Cluster 1. 4 ligand types 4 ligands Cluster 2. 2 ligand types 3 ligands Cluster 3. 2 ligand types 3 ligands Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 3 ligands Cluster 6. 1 ligand type 3 ligands
Representative protein: 5jg8A

Structures

PDB		Schematic diagram
5jg8A
5i8rA
5i81A

Cluster 1 contains 4 ligand types

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Ligand		Description
		1. Ligand: NAG × 1 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB code: 5jg8(A).
		2. Ligand: MAN-BMA × 1 BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose. PDB code: 5i81(A).
		3. Ligand: NAG-NAG × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB code: 5i8r(A).
		4. Ligand: NAG-NAG-BMA × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose. PDB code: 5i81(A).

Cluster 2 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG-NAG × 2 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 5i81(A), 5jg8(A).
		2. Ligand: NAG-NAG-MAN × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, MAN=Alpha-D-Mannopyranose. PDB code: 5i8r(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG × 1 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB code: 5i8r(A).
		2. Ligand: NAG-NAG × 2 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 5i81(A), 5jg8(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: NAG-NAG-BMA × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose. PDB code: 5i8r(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: NAG-NAG × 3 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 5i81(A), 5i8r(A), 5jg8(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: NAG × 3 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 5i81(A), 5i8r(A), 5jg8(A).