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Ligand clusters for UniProt code P16404

Ligand clusters for P16404: Lectin from Erythrina corallodendron

4 ligand clusters
Cluster 1.
2 ligand types
6 ligands
Cluster 2.
7 ligand types
11 ligands
Cluster 3.
1 ligand type
11 ligands
Cluster 4.
1 ligand type
1 ligand
Representative protein: 3n35A  
JSmol
 

Structures

PDB   Schematic diagram
3n35A    
3n36A    
3n3hA    
1fyuA    
1lteA    
 more ...

 

 Cluster 1 contains 2 ligand types

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Ligand Description


 
1. Ligand: NAG-NAG-BMA-XYP-MAN-MAN-FUC × 5
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, XYP=Beta-D-Xylopyranose, MAN=Alpha-D-Mannopyranose, FUC=Alpha-L-Fucopyranose.
PDB codes: 1ax0(A), 1ax1(A), 1ax2(A), 1axy(A), 1axz(A).


 
2. Ligand: NAG-NAG-BMA-XYL-MAN-MAN-FUC × 1
NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, XYL=Xylitol, MAN=Alpha-D-Mannopyranose, FUC=Alpha-L-Fucopyranose.
PDB code: 1lte(A).

 

 Cluster 2 contains 7 ligand types

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Ligand Description


 
1. Ligand: CIT × 1
citric acid
Citric acid
PDB code: 3n3h(A).


 
2. Ligand: GAL × 1
galactose
Beta-D-Galactopyranose
PDB code: 1axz(A).


 
3. Ligand: BGC-GAL × 3
BGC=Beta-D-Glucopyranose, GAL=Beta-D-Galactopyranose.
PDB codes: 1ax1(A), 1lte(A), 1sfy(A).


 
4. Ligand: A2G × 2
2-Acetamido-2-Deoxy-Alpha-D-Galactopyranose
PDB codes: 1ax0(A), 3n35(A).


 
5. Ligand: GLA × 2
Alpha-D-Galactopyranose
PDB codes: 1axz(A), 3n36(A).


 
6. Ligand: GLC-GAL × 1
GLC=Alpha-D-Glucopyranose, GAL=Beta-D-Galactopyranose.
PDB code: 1fyu(A).


 
7. Ligand: NDG-GAL × 1
NDG=2-Acetamido-2-Deoxy-Alpha-D-Glucopyranose, GAL=Beta-D-Galactopyranose.
PDB code: 1ax2(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description

_Mn
 
1. Metal: _MN × 11
PDB codes: 1ax0(A), 1ax1(A), 1ax2(A), 1axy(A), 1axz(A), 1fyu(A), 1lte(A), 1sfy(A), 3n35(A), 3n36(A), 3n3h(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description

_Ca
 
1. Metal: _CA × 1
PDB code: 3n3h(A).

 

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