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Ligand clusters for UniProt code P16404
Ligand clusters for P16404: Lectin from Erythrina corallodendron
4 ligand clusters
Cluster 1.
2 ligand types
6 ligands
Cluster 2.
7 ligand types
11 ligands
Cluster 3.
1 ligand type
11 ligands
Cluster 4.
1 ligand type
1 ligand
Representative protein: 3n35A
Structures
PDB
Schematic diagram
3n35
A
3n36
A
3n3h
A
1fyu
A
1lte
A
more ...
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
NAG-NAG-BMA-XYP-MAN-MAN-FUC × 5
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
BMA
=Beta-D-Mannopyranose,
XYP
=Beta-D-Xylopyranose,
MAN
=Alpha-D-Mannopyranose,
FUC
=Alpha-L-Fucopyranose.
PDB codes:
1ax0
(A),
1ax1
(A),
1ax2
(A),
1axy
(A),
1axz
(A).
2. Ligand:
NAG-NAG-BMA-XYL-MAN-MAN-FUC × 1
NAG
=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose,
BMA
=Beta-D-Mannopyranose,
XYL
=Xylitol,
MAN
=Alpha-D-Mannopyranose,
FUC
=Alpha-L-Fucopyranose.
PDB code:
1lte
(A).
Cluster 2 contains 7 ligand types
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Ligand
Description
1. Ligand:
CIT × 1
citric acid
Citric acid
PDB code:
3n3h
(A).
2. Ligand:
GAL × 1
galactose
Beta-D-Galactopyranose
PDB code:
1axz
(A).
3. Ligand:
BGC-GAL × 3
BGC
=Beta-D-Glucopyranose,
GAL
=Beta-D-Galactopyranose.
PDB codes:
1ax1
(A),
1lte
(A),
1sfy
(A).
4. Ligand:
A2G × 2
2-Acetamido-2-Deoxy-Alpha-D-Galactopyranose
PDB codes:
1ax0
(A),
3n35
(A).
5. Ligand:
GLA × 2
Alpha-D-Galactopyranose
PDB codes:
1axz
(A),
3n36
(A).
6. Ligand:
GLC-GAL × 1
GLC
=Alpha-D-Glucopyranose,
GAL
=Beta-D-Galactopyranose.
PDB code:
1fyu
(A).
7. Ligand:
NDG-GAL × 1
NDG
=2-Acetamido-2-Deoxy-Alpha-D-Glucopyranose,
GAL
=Beta-D-Galactopyranose.
PDB code:
1ax2
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
_Mn
1. Metal:
_MN × 11
PDB codes:
1ax0
(A),
1ax1
(A),
1ax2
(A),
1axy
(A),
1axz
(A),
1fyu
(A),
1lte
(A),
1sfy
(A),
3n35
(A),
3n36
(A),
3n3h
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
_Ca
1. Metal:
_CA × 1
PDB code:
3n3h
(A).