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Ligand clusters for UniProt code P13513

Ligand clusters for P13513: Trichodiene synthase from Fusarium sporotrichioides

4 ligand clusters
Cluster 1.
6 ligand types
16 ligands
Cluster 2.
2 ligand types
31 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
3 ligands
Representative protein: 1jfaA  
JSmol
 

Structures

PDB   Schematic diagram
1jfaA    
1jfgA    
2aelA    
2ps6A    
2ps5A    
 more ...

 

 Cluster 1 contains 6 ligand types

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Ligand Description


 
1. Ligand: POP × 1
Pyrophosphate 2-
PDB code: 1yyu(A).


 
2. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1jfg(A).

_Mg
 
3. Metal: _MG × 1
PDB code: 1yyu(A).


 
4. Ligand: SAZ × 3
(1s)-N,4-Dimethyl-N-(4-Methylpent-3-Enyl)cyclohex-3- Enaminium
PDB codes: 1yyr(A), 1yys(A), 1yyt(A).


 
5. Ligand: RAZ × 1
(1r)-N,4-Dimethyl-N-(4-Methylpent-3-Enyl)cyclohex-3- Enaminium
PDB code: 1yyu(A).


 
6. Ligand: EDO × 9
1,2-Ethanediol
PDB codes: 1jfa(A), 1kiy(A), 1kiz(A), 1yj4(A), 2aek(A), 2ael(A), 2ps4(A), 2ps5(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1jfg(A).


 
2. Ligand: EDO × 30
1,2-Ethanediol
PDB codes: 1jfa(A), 1kiy(A), 1kiz(A), 1yj4(A), 1yyr(A), 1yyu(A), 2aek(A), 2ael(A), 2aet(A), 2ps4(A), 2ps5(A), 2ps6(A), 2ps7(A), 2ps8(A), 2q9y(A), 2q9z(A),

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 1kiy(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description

_Mg
 
1. Metal: _MG × 3
PDB codes: 2aek(A), 2ps4(A), 2ps7(A).

 

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