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EBI
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PDBsum
Ligand clusters for UniProt code P13513
Ligand clusters for P13513: Trichodiene synthase from Fusarium sporotrichioides
4 ligand clusters
Cluster 1.
6 ligand types
16 ligands
Cluster 2.
2 ligand types
31 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
3 ligands
Representative protein: 1jfaA
Structures
PDB
Schematic diagram
1jfa
A
1jfg
A
2ael
A
2ps6
A
2ps5
A
more ...
Cluster 1 contains 6 ligand types
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Ligand
Description
1. Ligand:
POP × 1
Pyrophosphate 2-
PDB code:
1yyu
(A).
2. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1jfg
(A).
_Mg
3. Metal:
_MG × 1
PDB code:
1yyu
(A).
4. Ligand:
SAZ × 3
(1s)-N,4-Dimethyl-N-(4-Methylpent-3-Enyl)cyclohex-3- Enaminium
PDB codes:
1yyr
(A),
1yys
(A),
1yyt
(A).
5. Ligand:
RAZ × 1
(1r)-N,4-Dimethyl-N-(4-Methylpent-3-Enyl)cyclohex-3- Enaminium
PDB code:
1yyu
(A).
6. Ligand:
EDO × 9
1,2-Ethanediol
PDB codes:
1jfa
(A),
1kiy
(A),
1kiz
(A),
1yj4
(A),
2aek
(A),
2ael
(A),
2ps4
(A),
2ps5
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1jfg
(A).
2. Ligand:
EDO × 30
1,2-Ethanediol
PDB codes:
1jfa
(A),
1kiy
(A),
1kiz
(A),
1yj4
(A),
1yyr
(A),
1yyu
(A),
2aek
(A),
2ael
(A),
2aet
(A),
2ps4
(A),
2ps5
(A),
2ps6
(A),
2ps7
(A),
2ps8
(A),
2q9y
(A),
2q9z
(A),
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
1kiy
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
_Mg
1. Metal:
_MG × 3
PDB codes:
2aek
(A),
2ps4
(A),
2ps7
(A).