Ligand clusters for UniProt code P13000

Ligand clusters for P13000: ATP-dependent dethiobiotin synthetase BioD 1 from Escherichia coli (strain K12)

		3 ligand clusters Cluster 1. 14 ligand types 25 ligands Cluster 2. 1 ligand type 1 ligand Cluster 3. 1 ligand type 1 ligand
Representative protein: 1a82A

Structures

PDB		Schematic diagram
1a82A
1dafA
1dahA
1dagA
1bs1A
		more ...

Cluster 1 contains 14 ligand types

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Ligand		Description
		1. Ligand: ADP × 5 Adenosine-5'-Diphosphate PDB codes: 1bs1(A), 1dad(A), 1daf(A), 1dak(A), 1dam(A).
		2. Ligand: DNN × 2 7,8-Diamino-Nonanoic acid PDB codes: 1a82(A), 1dah(A).
		3. Ligand: ATP × 1 Adenosine-5'-Triphosphate PDB code: 1a82(A).
		4. Ligand: DTB × 1 6-(5-Methyl-2-Oxo-Imidazolidin-4-Yl)-Hexanoic acid PDB code: 1dam(A).
		5. Ligand: PO4 × 1 Phosphate ion PDB code: 1dam(A).
_Mg		6. Metal: _MG × 3 PDB codes: 1a82(A), 1dak(A), 1dam(A).
_Mn		7. Metal: _MN × 1 PDB code: 1dah(A).
		8. Ligand: DSD × 3 7-(Carboxyamino)-8-Amino-Nonanoic acid PDB codes: 1daf(A), 1dag(A), 1dai(A).
		9. Ligand: ACP × 2 Phosphomethylphosphonic acid adenylate ester PDB codes: 1dag(A), 1dah(A).
		10. Ligand: DAA × 1 8-Amino-7-Carboxyamino-Nonanoic acid with aluminum fluoride PDB code: 1bs1(A).
		11. Ligand: DPU × 1 Mixed carbamic phosphoric acid anhydride of 7,8- Diaminononanic acid PDB code: 1dak(A).
		12. Ligand: IKT × 1 3-(1-Aminoethyl)nonanedioic acid PDB code: 1dae(A).
		13. Ligand: SO4 × 2 Sulfate ion PDB codes: 1dbs(A),
_Ca		14. Metal: _CA × 1 PDB code: 1daf(A).

Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: PO4 × 1 Phosphate ion PDB code: 1dak(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 1 Sulfate ion PDB code: 1dbs(A).