Ligand clusters for UniProt code P12995

Ligand clusters for P12995: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase from Escherichia coli (strain K12)

		5 ligand clusters Cluster 1. 7 ligand types 14 ligands Cluster 2. 6 ligand types 12 ligands Cluster 3. 2 ligand types 11 ligands Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand
Representative protein: 1dtyA

Structures

PDB		Schematic diagram
1dtyA
1s06A
1s07A
6ed7A
1s08A
		more ...

Cluster 1 contains 7 ligand types

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Ligand		Description
		1. Ligand: KAP × 1 7-Keto-8-Aminopelargonic acid PDB code: 1qj3(A).
		2. Ligand: PLP × 7 pyridoxal phosphate Pyridoxal-5'-Phosphate PDB codes: 1dty(A), 1mgv(A), 1mly(A), 1mlz(A), 1qj3(A), 1qj5(A), 1s07(A).
		3. Ligand: IPA × 2 isopropyl alcohol Isopropyl alcohol PDB codes: 1mgv(A), 1s07(A).
		4. Ligand: ACZ × 1 Cis-Amiclenomycin PDB code: 1mly(A).
		5. Ligand: TZA × 1 Trans-Amiclenomycin PDB code: 1mlz(A).
		6. Ligand: J4J × 1 2-[(2-Nitrophenyl)sulfanyl]acetohydrazide PDB code: 6ed7(A).
		7. Ligand: PLP-J4J × 1 PLP=Pyridoxal-5'-Phosphate, J4J=2-[(2-Nitrophenyl)sulfanyl]acetohydrazide. PDB code: 6ed7(A).

Cluster 2 contains 6 ligand types

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Ligand		Description
		1. Ligand: KAP × 1 7-Keto-8-Aminopelargonic acid PDB code: 1qj3(A).
		2. Ligand: PLP × 7 pyridoxal phosphate Pyridoxal-5'-Phosphate PDB codes: 1dty(A), 1mgv(A), 1mly(A), 1mlz(A), 1qj3(A), 1qj5(A), 1s07(A).
		3. Ligand: IPA × 1 isopropyl alcohol Isopropyl alcohol PDB code: 1mgv(A).
		4. Ligand: ACZ × 1 Cis-Amiclenomycin PDB code: 1mly(A).
		5. Ligand: J4J × 1 2-[(2-Nitrophenyl)sulfanyl]acetohydrazide PDB code: 6ed7(A).
		6. Ligand: PLP-J4J × 1 PLP=Pyridoxal-5'-Phosphate, J4J=2-[(2-Nitrophenyl)sulfanyl]acetohydrazide. PDB code: 6ed7(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
__K		1. Metal: __K × 1 PDB code: 1qj5(A).
_Na		2. Metal: _NA × 10 PDB codes: 1dty(A), 1mgv(A), 1mly(A), 1mlz(A), 1qj3(A), 1s06(A), 1s07(A), 1s08(A), 1s09(A), 1s0a(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
_Na		1. Metal: _NA × 1 PDB code: 1dty(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
_Na		1. Metal: _NA × 1 PDB code: 1dty(A).