Ligand clusters for UniProt code P12694

Ligand clusters for P12694: 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial from Homo sapiens

		Top 6 (of 10) ligand clusters Cluster 1. 11 ligand types 56 ligands Cluster 2. 1 ligand type 3 ligands Cluster 3. 1 ligand type 3 ligands Cluster 4. 2 ligand types 2 ligands Cluster 5. 1 ligand type 23 ligands Cluster 6. 1 ligand type 1 ligand
Representative protein: 2bffA

Structures

PDB		Schematic diagram
2bffA
2bewA
2bevA
1olxA
1dtwA
		more ...

Cluster 1 contains 11 ligand types

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Ligand		Description
		1. Ligand: THV × 2 C2-1-Hydroxy-3-Methyl-Propyl-Thiamin diphosphate PDB codes: 2beu(A), 2j9f(A).
		2. Ligand: THY × 1 C2-1-Hydroxy-2-Methyl-Butyl-Thiamin diphosphate PDB code: 2bev(A).
		3. Ligand: WWF × 1 C2-1-Hydroxy-3-Methyl-Butyl-Thiamin PDB code: 1wci(A).
_Mn		4. Metal: _MN × 21 PDB codes: 1ols(A), 1olx(A), 1u5b(A), 1v11(A), 1v16(A), 1v1m(A), 1wci(A), 1x7w(A), 1x7x(A), 1x7y(A), 1x7z(A), 1x80(A), 2beu(A), 2bev(A), 2bew(A), 2bfb(A), 2bfc(A), 2bfd(A), 2bfe(A), 2bff(A), 2j9f(A).
		5. Ligand: TDP × 16 cocarboxylase Thiamin diphosphate PDB codes: 1dtw(A), 1ols(A), 1olu(A), 1olx(A), 1u5b(A), 1v11(A), 1v16(A), 1v1m(A), 1x7w(A), 1x7x(A), 1x7y(A), 1x7z(A), 1x80(A), 2bfb(A), 2bfd(A), 2bfe(A).
_Mg		6. Metal: _MG × 2 PDB codes: 1dtw(A), 1olu(A).
		7. Ligand: THW × 1 C2-1-Hydroxyphenyl-Thiamin diphosphate PDB code: 2bew(A).
		8. Ligand: TZD × 2 2-{3-[(4-Amino-2-Methylpyrimidin-5-Yl)methyl]-4-Methyl- 2-Oxo-2,3-Dihydro-1,3-Thiazol-5- Yl}ethyl trihydrogen diphosphate PDB codes: 2bfc(A), 2bff(A).
_Cl		9. Metal: _CL × 7 PDB codes: 1v1m(A), 1x7w(A), 1x7x(A), 1x7y(A), 1x7z(A), 1x80(A), 2bfb(A).
_Na		10. Metal: _NA × 2 PDB codes: 1v1r(A),
		11. Ligand: SO4 × 1 Sulfate ion PDB code: 1v1r(A).

Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: ALA-TYR-ARG × 3 PDB codes: 2beu(A), 2bev(A), 2bew(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: BEN × 3 Benzamidine PDB codes: 1v11(A), 1v16(A), 1v1m(A).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 1olx(A).
_Cl		2. Metal: _CL × 1 PDB code: 2bfd(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 23 glycerin Glycerol PDB codes: 1ols(A), 1olu(A), 1olx(A), 1u5b(A), 1v11(A), 1v16(A), 1v1m(A), 1v1r(A), 1wci(A), 1x7w(A), 1x7x(A), 1x7y(A), 1x7z(A), 1x80(A), 2beu(A), 2bev(A), 2bew(A), 2bfb(A), 2bfc(A), 2bfd(A), 2bfe(A), 2bff(A), 2j9f(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 1olu(A).