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EBI Databases Structure Databases PDBsum

Ligand clusters for UniProt code P11124

Ligand clusters for P11124: RNA-directed RNA polymerase from Pseudomonas phage phi6

1 ligand cluster
Cluster 1.
8 ligand types
41 ligands
Representative protein: 1hhsA  
JSmol
 

Structures

PDB   Schematic diagram
1hhsA    
5fj7C    
5fj6A    
4b02A    
4a8mP    
 more ...

 

 Cluster 1 contains 8 ligand types

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Ligand Description


 
1. Ligand: ATP × 1
Adenosine-5'-Triphosphate
PDB code: 1hi1(A).

_Mn
 
2. Metal: _MN × 13
PDB codes: 1hhs(A), 1hht(P), 1hi0(P), 1uvi(A), 1uvj(A), 1uvl(A), 1uvm(A), 1uvn(A), 2jlf(A), 4a8o(A), 4b02(A), 5fj6(A), 5fj7(C).

_Mg
 
3. Metal: _MG × 9
PDB codes: 1hi0(P), 1hi8(A), 4a8f(A), 4a8k(A), 4a8m(P), 4a8q(A), 4a8s(A), 4a8w(A), 4a8y(A).


 
4. Ligand: GTP × 4
Guanosine-5'-Triphosphate
PDB codes: 1hi0(P), 1uvn(A),


 
5. Ligand: ATP × 7
Adenosine-5'-Triphosphate
PDB codes: 4a8f(A), 4a8m(P), 4a8q(A), 4a8s(A), 4a8w(A), 4a8y(A).


 
6. Ligand: GTP × 3
Guanosine-5'-Triphosphate
PDB codes: 2jlg(A), 4a8k(A), 4a8m(P).

_Ca
 
7. Metal: _CA × 2
PDB codes: 1uvn(A),


 
8. Ligand: _DC-_DG × 2
PDB codes: 4a8w(A), 4a8y(A).

 

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