Ligand clusters for UniProt code P10121

Ligand clusters for P10121: Signal recognition particle receptor FtsY from Escherichia coli (strain K12)

		Top 6 (of 15) ligand clusters Cluster 1. 5 ligand types 12 ligands Cluster 2. 5 ligand types 5 ligands Cluster 3. 4 ligand types 4 ligands Cluster 4. 2 ligand types 2 ligands Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 2yhsA

Structures

PDB		Schematic diagram
2yhsA
6n6nA
6cs8A
6nc1A
6nc4A
		more ...

Cluster 1 contains 5 ligand types

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Ligand		Description
_Mg		1. Metal: _MG × 2 PDB codes: 2xxa(B), 4c7o(B).
		2. Ligand: GDP × 4 Guanosine-5'-Diphosphate PDB codes: 4c7o(B), 6fqd(A), 6nc1(A).
		3. Ligand: GCP × 3 Phosphomethylphosphonic acid guanylate ester PDB codes: 2xxa(B), 6n6n(A).
		4. Ligand: GNP × 2 Phosphoaminophosphonic acid-Guanylate ester PDB codes: 5niy(A), 6nc4(A).
		5. Ligand: ALF × 1 Tetrafluoroaluminate ion PDB code: 4c7o(B).

Cluster 2 contains 5 ligand types

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Ligand		Description
		1. Ligand: 4ME × 1 Methyl 1h-Indole-4-Carboxylate PDB code: 6cvd(A).
		2. Ligand: ACT × 1 Acetate ion PDB code: 6nc4(A).
		3. Ligand: EDO × 1 1,2-Ethanediol PDB code: 2yhs(A).
		4. Ligand: F9Y × 1 1h-Indole-6-Carbonitrile PDB code: 6cs8(A).
		5. Ligand: GXY × 1 4-Bromo-2,5-Dimethoxyaniline PDB code: 6dlx(A).

Cluster 3 contains 4 ligand types

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Ligand		Description
		1. Ligand: 4ME × 1 Methyl 1h-Indole-4-Carboxylate PDB code: 6cvd(A).
		2. Ligand: ACT × 1 Acetate ion PDB code: 6nc4(A).
		3. Ligand: F9Y × 1 1h-Indole-6-Carbonitrile PDB code: 6cs8(A).
		4. Ligand: GXY × 1 4-Bromo-2,5-Dimethoxyaniline PDB code: 6dlx(A).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: ACT × 1 Acetate ion PDB code: 6n6n(A).
		2. Ligand: PEG × 1 Di(hydroxyethyl)ether PDB code: 6dlx(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 6cqp(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 6n5i(A).