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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code P0DTD1_8
Ligand clusters for P0DTD1_8: NSP8 - complex with NSP7 is part of RNA polymerase (198 aa)
4 ligand clusters
Cluster 1.
2 ligand types
2 ligands
Cluster 2.
2 ligand types
3 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Representative protein: 6wqdB
Structures
PDB
Schematic diagram
6wqd
B
6xip
B
6wtc
B
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
ACY × 1
acetic acid
Acetic acid
PDB code:
6wtc
(B).
2. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
6wqd
(B).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
ACY × 1
acetic acid
Acetic acid
PDB code:
6wtc
(B).
2. Ligand:
EDO × 2
1,2-Ethanediol
PDB codes:
6wqd
(B),
6xip
(B).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
6xip
(B).
Cluster 4 contains 1 ligand type
Selection shortcuts:
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
6xip
(B).