Ligand clusters for UniProt code P0ABD3

Ligand clusters for P0ABD3: Bacterioferritin OS=Escherichia coli (strain K12) OX=83333 GN=bfr PE=1 SV=1

		Top 6 (of 13) ligand clusters Cluster 1. 2 ligand types 19 ligands Cluster 2. 3 ligand types 5 ligands Cluster 3. 2 ligand types 14 ligands Cluster 4. 2 ligand types 11 ligands Cluster 5. 6 ligand types 32 ligands Cluster 6. 2 ligand types 2 ligands
Representative protein: 1bcfA

Structures

PDB		Schematic diagram
1bcfA
4cvtA
4cvpA
4cvsA
3e1pA
		more ...

Cluster 1 contains 2 ligand types

Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file. Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: HEM × 17 Protoporphyrin IX containing fe PDB codes: 1bcf(A), 1bfr(A), 2htn(A), 2vxi(A), 2y3q(A), 3e1j(A), 3e1l(A), 3e1m(A), 3e1n(A), 3e1o(A), 3e1p(A), 3e1q(A), 3e2c(A), 3ghq(A).
		2. Ligand: ZNH × 2 Protoporphyrin IX containing zn PDB codes: 6p8k(A), 6p8l(A).

Cluster 2 contains 3 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: MLI × 2 Malonate ion PDB codes: 6p8k(A), 6p8l(A).
		2. Ligand: SO4 × 2 Sulfate ion PDB codes: 2vxi(A), 3ghq(A).
		3. Ligand: ACT × 1 Acetate ion PDB code: 2y3q(A).

Cluster 3 contains 2 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: SO4 × 12 Sulfate ion PDB codes: 2vxi(A), 2y3q(A), 3e1j(A), 3e1l(A), 3e1m(A), 3e1n(A), 3e1o(A), 3e1p(A), 3e1q(A), 3ghq(A), 4xks(A), 4xku(A).
		2. Ligand: MLI × 2 Malonate ion PDB codes: 6p8k(A), 6p8l(A).

Cluster 4 contains 2 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: SO4 × 9 Sulfate ion PDB codes: 3e1j(A), 3e1l(A), 3e1m(A), 3e1n(A), 3e1o(A), 3e1p(A), 3e1q(A), 3ghq(A), 4xks(A).
		2. Ligand: MLI × 2 Malonate ion PDB codes: 6p8k(A), 6p8l(A).

Cluster 5 contains 6 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
_Fe		1. Metal: _FE × 5 PDB codes: 2htn(A), 3ghq(A), 4cvp(A),
_Mn		2. Metal: _MN × 4 PDB codes: 1bcf(A), 1bfr(A),
_Zn		3. Metal: _ZN × 13 PDB codes: 2vxi(A), 3e1o(A), 3e1p(A), 3e2c(A), 4cvr(A), 4cvt(A), 6p8k(A), 6p8l(A).
Fe2		4. Metal: FE2 × 6 PDB codes: 3e1m(A), 3e1n(A), 3e1q(A),
		5. Ligand: EDO × 2 1,2-Ethanediol PDB codes: 3e2c(A),
_Cd		6. Metal: _CD × 2 PDB codes: 4cvs(A),

Cluster 6 contains 2 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: ACT × 1 Acetate ion PDB code: 2y3q(A).
		2. Ligand: SO4 × 1 Sulfate ion PDB code: 2vxi(A).