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Ligand clusters for UniProt code P0A817

Ligand clusters for P0A817: S-adenosylmethionine synthase OS=Escherichia coli (strain K12) GN=metK PE=1 SV=2

4 ligand clusters
Cluster 1.
11 ligand types
24 ligands
Cluster 2.
6 ligand types
8 ligands
Cluster 3.
1 ligand type
6 ligands
Cluster 4.
1 ligand type
6 ligands
Representative protein: 1p7lA  
JSmol
 

Structures

PDB   Schematic diagram
1p7lA    
1xrcA    
1rg9A    
1xrbA    
1mxcA    
 more ...

 

 Cluster 1 contains 11 ligand types

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Ligand Description


 
1. Ligand: PO4 × 9
Phosphate ion
PDB codes: 1mxa(A), 1mxb(A), 1mxc(A), 1xra(A), 1xrb(A), 1xrc(A),


 
2. Ligand: MET × 1
PDB code: 1p7l(A).


 
3. Ligand: POP × 1
Pyrophosphate 2-
PDB code: 1mxa(A).


 
4. Ligand: SAM × 1
s-adenosylmethionine
S-Adenosylmethionine
PDB code: 1rg9(A).


 
5. Ligand: ADP × 1
Adenosine-5'-Diphosphate
PDB code: 1mxb(A).


 
6. Ligand: ABP × 1
8-Bromoadenosine-5'-Diphosphate
PDB code: 1mxc(A).


 
7. Ligand: ANP × 1
Phosphoaminophosphonic acid-Adenylate ester
PDB code: 1p7l(A).


 
8. Ligand: PPK × 1
(Diphosphono)aminophosphonic acid
PDB code: 1rg9(A).

_Mg
 
9. Metal: _MG × 5
PDB codes: 1mxa(A), 1mxb(A), 1mxc(A), 1xra(A), 1xrb(A).

__K
 
10. Metal: __K × 2
PDB codes: 1p7l(A), 1rg9(A).

_Co
 
11. Metal: _CO × 1
PDB code: 1xrc(A).

 

 Cluster 2 contains 6 ligand types

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Ligand Description


 
1. Ligand: MET × 1
PDB code: 1p7l(A).


 
2. Ligand: SAM × 1
s-adenosylmethionine
S-Adenosylmethionine
PDB code: 1rg9(A).


 
3. Ligand: ANP × 1
Phosphoaminophosphonic acid-Adenylate ester
PDB code: 1p7l(A).


 
4. Ligand: PPK × 1
(Diphosphono)aminophosphonic acid
PDB code: 1rg9(A).

_Mg
 
5. Metal: _MG × 2
PDB codes: 1p7l(A), 1rg9(A).

__K
 
6. Metal: __K × 2
PDB codes: 1p7l(A), 1rg9(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description

__K
 
1. Metal: __K × 6
PDB codes: 1mxa(A), 1mxb(A), 1mxc(A), 1xra(A), 1xrb(A), 1xrc(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description

__K
 
1. Metal: __K × 6
PDB codes: 1mxa(A), 1mxb(A), 1mxc(A), 1xra(A), 1xrb(A), 1xrc(A).

 

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