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Ligand clusters for UniProt code P0A6I6

Ligand clusters for P0A6I6: Phosphopantetheine adenylyltransferase OS=Escherichia coli (strain K12) OX=83333 GN=coaD PE=1 SV=1

Top 6 (of 10) ligand clusters
Cluster 1.
26 ligand types
65 ligands
Cluster 2.
1 ligand type
4 ligands
Cluster 3.
2 ligand types
4 ligands
Cluster 4.
2 ligand types
4 ligands
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 5jbnA  
JSmol
 

Structures

PDB   Schematic diagram
5jbnA    
6chqA    
6ccmA    
6b7dA    
6b7bA    
 more ...

 

 Cluster 1 contains 26 ligand types (of which only 20 are listed. Click for all)

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Ligand Description


 
1. Ligand: ATP × 1
Adenosine-5'-Triphosphate
PDB code: 1gn8(A).


 
2. Ligand: DMS × 6
dimethyl sulfoxide
Dimethyl sulfoxide
PDB codes: 6b7b(A), 6b7c(A), 6b7f(A), 6ccl(A), 6ckw(A),


 
3. Ligand: TRS × 1
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB code: 6b7f(A).


 
4. Ligand: COA × 1
Coenzyme a
PDB code: 1h1t(A).


 
5. Ligand: SO4 × 33
Sulfate ion
PDB codes: 1qjc(A), 5jbn(A), 6b7a(A), 6b7b(A), 6b7d(A), 6b7e(A), 6ccl(A), 6ccm(A), 6ccn(A), 6cco(A), 6ccq(A), 6ccs(A), 6chl(A), 6chm(A), 6chn(A), 6cho(A), 6chp(A), 6chq(A), 6ckw(A),


 
6. Ligand: ATP × 1
Adenosine-5'-Triphosphate
PDB code: 6cck(A).


 
7. Ligand: EXJ × 2
(3r)-3-(3-Chlorophenyl)-3-[(5-Methyl-7-Oxo-6,7- Dihydro[1,2,4]triazolo[1,5-A]pyrimidin-2-
Yl) amino]propanenitrile
PDB codes: 6cck(A), 6chl(A).


 
8. Ligand: POP × 2
Pyrophosphate 2-
PDB codes: 6b7c(A), 6b7f(A).


 
9. Ligand: CWG × 1
3-(4-Chlorophenyl)-6-Methoxy-4,5-Dimethylpyridazine
PDB code: 6b7d(A).


 
10. Ligand: CWJ × 1
5-Methoxy-2-Methyl-1h-Indole
PDB code: 6b7b(A).


 
11. Ligand: CWM × 1
2-Methyl-1h-Benzimidazol-7-Ol
PDB code: 6b7a(A).


 
12. Ligand: CWP × 1
N-[(1,3-Dimethyl-1h-Pyrazol-5-Yl)methyl]-5-Methyl-3h- Imidazo[4,5-B]pyridin-2-Amine
PDB code: 6b7c(A).


 
13. Ligand: EX7 × 1
2-[2-(3-Chlorophenyl)ethyl]-1h-Benzimidazol-7-Ol
PDB code: 6ccq(A).


 
14. Ligand: EXD × 1
2-(Trifluoromethyl)-1h-Benzimidazol-7-Ol
PDB code: 6ccs(A).


 
15. Ligand: EXG × 1
1-Benzyl-1h-Imidazo[4,5-B]pyridine
PDB code: 6ccl(A).


 
16. Ligand: EXP × 1
2-{[(3-Bromophenyl)methyl]amino}-5-Methyl[1,2, 4]triazolo[1,5-A]pyrimidin-7(6h)-One
PDB code: 6ccm(A).


 
17. Ligand: EXS × 1
(2r)-2,4-Dihydroxy-N-[2-(7-Hydroxy-1h-Benzimidazol-2- Yl)ethyl]-3,3-Dimethylbutanamide
PDB code: 6ccn(A).


 
18. Ligand: EXV × 1
3-[(1s,2s)-2-(7-Hydroxy-1h-Benzimidazol-2-Yl) cyclopentyl]benzoic acid
PDB code: 6cco(A).


 
19. Ligand: F0V × 1
2-Benzyl-7-[(3-Chloro-4-Methylphenyl)amino]-5-Methyl- 3h-[1,2,4]triazolo[1,5-A]pyrimidin-8-Ium
PDB code: 6chq(A).


 
20. Ligand: F0Y × 1
Methyl 4-[(3-{(1r)-2-Cyano-1-[(5-Methyl-3h-Imidazo[4,5- B]pyridin-2-
Yl)amino]ethyl}phenyl)methyl]piperidine-1- Carboxylate
PDB code: 6chp(A).

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 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: PG4 × 4
Tetraethylene glycol
PDB codes: 6chn(A), 6cho(A), 6chp(A), 6chq(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: DMS × 3
dimethyl sulfoxide
Dimethyl sulfoxide
PDB codes: 6b7b(A), 6b7c(A), 6b7e(A).


 
2. Ligand: SO4 × 1
Sulfate ion
PDB code: 6b7a(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: DMS × 3
dimethyl sulfoxide
Dimethyl sulfoxide
PDB codes: 6b7d(A), 6b7e(A), 6chq(A).


 
2. Ligand: SO4 × 1
Sulfate ion
PDB code: 6cho(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: PEG × 2
Di(hydroxyethyl)ether
PDB codes: 6b7a(A), 6b7c(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: PEG × 1
Di(hydroxyethyl)ether
PDB code: 6chn(A).

 

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