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Ligand clusters for UniProt code P0A6I6
Ligand clusters for P0A6I6: Phosphopantetheine adenylyltransferase OS=Escherichia coli (strain K12) OX=83333 GN=coaD PE=1 SV=1
Top 6 (of 10) ligand clusters
Cluster 1.
26 ligand types
65 ligands
Cluster 2.
1 ligand type
4 ligands
Cluster 3.
2 ligand types
4 ligands
Cluster 4.
2 ligand types
4 ligands
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 5jbnA
Structures
PDB
Schematic diagram
5jbn
A
6chq
A
6ccm
A
6b7d
A
6b7b
A
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Cluster 1 contains 26 ligand types (of which only 20 are listed. Click
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Ligand
Description
1. Ligand:
ATP × 1
Adenosine-5'-Triphosphate
PDB code:
1gn8
(A).
2. Ligand:
DMS × 6
dimethyl sulfoxide
Dimethyl sulfoxide
PDB codes:
6b7b
(A),
6b7c
(A),
6b7f
(A),
6ccl
(A),
6ckw
(A),
3. Ligand:
TRS × 1
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB code:
6b7f
(A).
4. Ligand:
COA × 1
Coenzyme a
PDB code:
1h1t
(A).
5. Ligand:
SO4 × 33
Sulfate ion
PDB codes:
1qjc
(A),
5jbn
(A),
6b7a
(A),
6b7b
(A),
6b7d
(A),
6b7e
(A),
6ccl
(A),
6ccm
(A),
6ccn
(A),
6cco
(A),
6ccq
(A),
6ccs
(A),
6chl
(A),
6chm
(A),
6chn
(A),
6cho
(A),
6chp
(A),
6chq
(A),
6ckw
(A),
6. Ligand:
ATP × 1
Adenosine-5'-Triphosphate
PDB code:
6cck
(A).
7. Ligand:
EXJ × 2
(3r)-3-(3-Chlorophenyl)-3-[(5-Methyl-7-Oxo-6,7- Dihydro[1,2,4]triazolo[1,5-A]pyrimidin-2-
Yl) amino]propanenitrile
PDB codes:
6cck
(A),
6chl
(A).
8. Ligand:
POP × 2
Pyrophosphate 2-
PDB codes:
6b7c
(A),
6b7f
(A).
9. Ligand:
CWG × 1
3-(4-Chlorophenyl)-6-Methoxy-4,5-Dimethylpyridazine
PDB code:
6b7d
(A).
10. Ligand:
CWJ × 1
5-Methoxy-2-Methyl-1h-Indole
PDB code:
6b7b
(A).
11. Ligand:
CWM × 1
2-Methyl-1h-Benzimidazol-7-Ol
PDB code:
6b7a
(A).
12. Ligand:
CWP × 1
N-[(1,3-Dimethyl-1h-Pyrazol-5-Yl)methyl]-5-Methyl-3h- Imidazo[4,5-B]pyridin-2-Amine
PDB code:
6b7c
(A).
13. Ligand:
EX7 × 1
2-[2-(3-Chlorophenyl)ethyl]-1h-Benzimidazol-7-Ol
PDB code:
6ccq
(A).
14. Ligand:
EXD × 1
2-(Trifluoromethyl)-1h-Benzimidazol-7-Ol
PDB code:
6ccs
(A).
15. Ligand:
EXG × 1
1-Benzyl-1h-Imidazo[4,5-B]pyridine
PDB code:
6ccl
(A).
16. Ligand:
EXP × 1
2-{[(3-Bromophenyl)methyl]amino}-5-Methyl[1,2, 4]triazolo[1,5-A]pyrimidin-7(6h)-One
PDB code:
6ccm
(A).
17. Ligand:
EXS × 1
(2r)-2,4-Dihydroxy-N-[2-(7-Hydroxy-1h-Benzimidazol-2- Yl)ethyl]-3,3-Dimethylbutanamide
PDB code:
6ccn
(A).
18. Ligand:
EXV × 1
3-[(1s,2s)-2-(7-Hydroxy-1h-Benzimidazol-2-Yl) cyclopentyl]benzoic acid
PDB code:
6cco
(A).
19. Ligand:
F0V × 1
2-Benzyl-7-[(3-Chloro-4-Methylphenyl)amino]-5-Methyl- 3h-[1,2,4]triazolo[1,5-A]pyrimidin-8-Ium
PDB code:
6chq
(A).
20. Ligand:
F0Y × 1
Methyl 4-[(3-{(1r)-2-Cyano-1-[(5-Methyl-3h-Imidazo[4,5- B]pyridin-2-
Yl)amino]ethyl}phenyl)methyl]piperidine-1- Carboxylate
PDB code:
6chp
(A).
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Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
PG4 × 4
Tetraethylene glycol
PDB codes:
6chn
(A),
6cho
(A),
6chp
(A),
6chq
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
DMS × 3
dimethyl sulfoxide
Dimethyl sulfoxide
PDB codes:
6b7b
(A),
6b7c
(A),
6b7e
(A).
2. Ligand:
SO4 × 1
Sulfate ion
PDB code:
6b7a
(A).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
DMS × 3
dimethyl sulfoxide
Dimethyl sulfoxide
PDB codes:
6b7d
(A),
6b7e
(A),
6chq
(A).
2. Ligand:
SO4 × 1
Sulfate ion
PDB code:
6cho
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
PEG × 2
Di(hydroxyethyl)ether
PDB codes:
6b7a
(A),
6b7c
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
PEG × 1
Di(hydroxyethyl)ether
PDB code:
6chn
(A).