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EBI
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Structure Databases
PDBsum
Ligand clusters for UniProt code P09989
Ligand clusters for P09989: Ribosome-inactivating protein alpha-trichosanthin OS=Trichosanthes kirilowii PE=1 SV=2
Top 6 (of 11) ligand clusters
Cluster 1.
4 ligand types
6 ligands
Cluster 2.
2 ligand types
3 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1nliA
Structures
PDB
Schematic diagram
1nli
A
1tcs
A
1qd2
A
1mrk
A
1mrj
A
more ...
Cluster 1 contains 4 ligand types
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Ligand
Description
1. Ligand:
ADE × 3
adenine
Adenine
PDB codes:
1giu
(A),
1nli
(A),
1qd2
(A).
2. Ligand:
ADN × 1
adenosine
Adenosine
PDB code:
1mrj
(A).
3. Ligand:
FMC × 1
Formycin
PDB code:
1mrk
(A).
4. Ligand:
NDP × 1
Nadph dihydro-Nicotinamide-Adenine-Dinucleotide phosphate
PDB code:
1tcs
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
PEG × 2
Di(hydroxyethyl)ether
PDB codes:
2jjr
(A),
2. Ligand:
ASP-ASP-ASP-MET-GLY-PHE-GLY-LEU-PHE-ASP × 1
PDB code:
2jdl
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
TAM × 1
Tris(hydroxyethyl)aminomethane
PDB code:
2jjr
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
PEG × 1
Di(hydroxyethyl)ether
PDB code:
2jjr
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
PEG × 1
Di(hydroxyethyl)ether
PDB code:
2jjr
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
PEG × 1
Di(hydroxyethyl)ether
PDB code:
2jjr
(A).