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Ligand clusters for UniProt code P09883

Ligand clusters for P09883: Colicin-E9 from Escherichia coli

Top 6 (of 8) ligand clusters
Cluster 1.
6 ligand types
31 ligands
Cluster 2.
2 ligand types
4 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1fsjB  
JSmol
 

Structures

PDB   Schematic diagram
1fsjB    
1v14A    
2vlpB    
2vloB    
1v15B    
 more ...

 

 Cluster 1 contains 6 ligand types

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Ligand Description

_Zn
 
1. Metal: _ZN × 12
PDB codes: 1fr2(B), 1fsj(B), 1v13(A), 1v15(A), 2gyk(B), 2gze(B), 2gzf(B), 2gzg(B), 2gzi(B), 2gzj(B).

_Mg
 
2. Metal: _MG × 1
PDB code: 1v14(A).


 
3. Ligand: PO4 × 10
Phosphate ion
PDB codes: 1bxi(B), 1emv(B), 1fr2(B), 1fsj(B), 2gyk(B), 2gze(B), 2gzf(B), 2gzg(B), 2gzi(B), 2gzj(B).


 
4. Ligand: MLA × 6
Malonic acid
PDB codes: 2vln(B), 2vlp(B), 2vlq(B),


 
5. Ligand: SO4 × 1
Sulfate ion
PDB code: 2vlo(B).

_Ni
 
6. Metal: _NI × 1
PDB code: 1bxi(B).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: MLA × 3
Malonic acid
PDB codes: 2vln(B), 2vlp(B), 2vlq(B).


 
2. Ligand: SO4 × 1
Sulfate ion
PDB code: 2vlo(B).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 2wpt(B).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: PO4 × 1
Phosphate ion
PDB code: 1fsj(B).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 2vlo(B).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 2vlo(B).

 

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