Your browser does not support inline frames or is currently configured not to display inline frames. Content can be viewed at actual source page: inc/head.html
EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code P08536
Ligand clusters for P08536: Sulfate adenylyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MET3 PE=1 SV=2
Top 6 (of 28) ligand clusters
Cluster 1.
6 ligand types
10 ligands
Cluster 2.
4 ligand types
16 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
2 ligands
Cluster 5.
2 ligand types
12 ligands
Cluster 6.
2 ligand types
18 ligands
Representative protein: 1j70A
Structures
PDB
Schematic diagram
1j70
A
1g8f
A
1g8h
A
1g8g
A
1jec
A
more ...
Cluster 1 contains 6 ligand types
Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file.
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
ADX × 3
Adenosine-5'-Phosphosulfate
PDB codes:
1g8g
(A),
1g8h
(A),
1jee
(A).
2. Ligand:
POP × 2
Pyrophosphate 2-
PDB codes:
1g8h
(A),
1jee
(A).
3. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
1g8f
(A),
1r6x
(A).
4. Ligand:
ADP × 1
Adenosine-5'-Diphosphate
PDB code:
1jed
(A).
5. Ligand:
THJ × 1
Thiosulfate
PDB code:
1jec
(A).
6. Ligand:
PO4 × 1
Phosphate ion
PDB code:
1j70
(A).
Cluster 2 contains 4 ligand types
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
SO4 × 3
Sulfate ion
PDB codes:
1g8f
(A),
1jec
(A),
1r6x
(A).
2. Ligand:
ACY × 6
Acetic acid
PDB codes:
1g8f
(A),
1g8g
(A),
1g8h
(A),
1jec
(A),
1jed
(A),
1jee
(A).
_Cd
3. Metal:
_CD × 6
PDB codes:
1g8f
(A),
1g8g
(A),
1g8h
(A),
1jec
(A),
1jed
(A),
1jee
(A).
_Co
4. Metal:
_CO × 1
PDB code:
1r6x
(A).
Cluster 3 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
TRS × 2
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB codes:
1g8f
(A),
1g8g
(A).
Cluster 4 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
TRS × 2
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB codes:
1jed
(A),
1jee
(A).
Cluster 5 contains 2 ligand types
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
ACY × 6
Acetic acid
PDB codes:
1g8f
(A),
1g8g
(A),
1g8h
(A),
1jec
(A),
1jed
(A),
1jee
(A).
_Cd
2. Metal:
_CD × 6
PDB codes:
1g8f
(A),
1g8g
(A),
1g8h
(A),
1jec
(A),
1jed
(A),
1jee
(A).
Cluster 6 contains 2 ligand types
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
ACY × 12
Acetic acid
PDB codes:
1g8f
(A),
1g8g
(A),
1g8h
(A),
1jec
(A),
1jed
(A),
1jee
(A),
_Cd
2. Metal:
_CD × 6
PDB codes:
1g8f
(A),
1g8g
(A),
1g8h
(A),
1jec
(A),
1jed
(A),
1jee
(A).