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Ligand clusters for UniProt code P08312

Ligand clusters for P08312: Phenylalanine--tRNA ligase alpha subunit from Escherichia coli (strain K12)

Top 6 (of 16) ligand clusters
Cluster 1.
5 ligand types
8 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3pcoC  
JSmol
 

Structures

PDB   Schematic diagram
3pcoC    
6p24C    
6p24A    
3pcoA    

 

 Cluster 1 contains 5 ligand types

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Ligand Description


 
1. Ligand: PHE × 2
phenylalanine
PDB codes: 3pco(A),

_Mg
 
2. Metal: _MG × 2
PDB codes: 6p24(A),


 
3. Ligand: AMP × 2
Adenosine monophosphate
PDB codes: 3pco(A),


 
4. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 6p24(C).


 
5. Ligand: HEZ × 1
Hexane-1,6-Diol
PDB code: 6p24(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: TRS × 1
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB code: 6p24(A).


 
2. Ligand: PEG × 1
Di(hydroxyethyl)ether
PDB code: 6p24(C).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 6p24(C).


 
2. Ligand: HEZ × 1
Hexane-1,6-Diol
PDB code: 6p24(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: PGE × 1
Triethylene glycol
PDB code: 6p24(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: TRS × 1
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB code: 6p24(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: TRS × 1
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB code: 6p24(C).

 

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