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EBI
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PDBsum
Ligand clusters for UniProt code P08312
Ligand clusters for P08312: Phenylalanine--tRNA ligase alpha subunit from Escherichia coli (strain K12)
Top 6 (of 16) ligand clusters
Cluster 1.
5 ligand types
8 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3pcoC
Structures
PDB
Schematic diagram
3pco
C
6p24
C
6p24
A
3pco
A
Cluster 1 contains 5 ligand types
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Ligand
Description
1. Ligand:
PHE × 2
phenylalanine
PDB codes:
3pco
(A),
_Mg
2. Metal:
_MG × 2
PDB codes:
6p24
(A),
3. Ligand:
AMP × 2
Adenosine monophosphate
PDB codes:
3pco
(A),
4. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
6p24
(C).
5. Ligand:
HEZ × 1
Hexane-1,6-Diol
PDB code:
6p24
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
TRS × 1
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB code:
6p24
(A).
2. Ligand:
PEG × 1
Di(hydroxyethyl)ether
PDB code:
6p24
(C).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
6p24
(C).
2. Ligand:
HEZ × 1
Hexane-1,6-Diol
PDB code:
6p24
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
PGE × 1
Triethylene glycol
PDB code:
6p24
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
TRS × 1
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB code:
6p24
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
TRS × 1
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB code:
6p24
(C).