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Structure Databases
PDBsum
Ligand clusters for UniProt code P08263
Ligand clusters for P08263: Glutathione S-transferase A1 from Homo sapiens
Top 6 (of 11) ligand clusters
Cluster 1.
17 ligand types
35 ligands
Cluster 2.
11 ligand types
24 ligands
Cluster 3.
5 ligand types
9 ligands
Cluster 4.
2 ligand types
4 ligands
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
3 ligands
Representative protein: 1gseA
Structures
PDB
Schematic diagram
1gse
A
5jcu
A
1ydk
A
2r6k
A
5lcz
B
more ...
Cluster 1 contains 17 ligand types
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Ligand
Description
1. Ligand:
GSH × 6
glutathione
Glutathione
PDB codes:
1gse
(A),
1pkw
(A),
1usb
(A),
3i6a
(A),
5lcz
(A),
6ato
(A).
2. Ligand:
EAA × 2
etacrynic acid
Ethacrynic acid
PDB codes:
1gse
(A),
1gsf
(A).
3. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
1k3y
(A),
6yaw
(A).
4. Ligand:
GSB × 1
S-Benzyl-Glutathione
PDB code:
1guh
(A).
5. Ligand:
GTX × 4
S-Hexylglutathione
PDB codes:
1k3l
(A),
1k3y
(A),
1ydk
(A),
6. Ligand:
ABY × 2
N-(4-Aminobutanoyl)-S-(4-Methoxybenzyl)-L- Cysteinylglycine
PDB codes:
1pl1
(A),
1pl2
(A).
7. Ligand:
GTX × 4
S-Hexylglutathione
PDB codes:
2r3x
(A),
2r6k
(A),
3ktl
(A),
3l0h
(A).
8. Ligand:
EDO × 3
1,2-Ethanediol
PDB codes:
5jcu
(A),
6atr
(A),
9. Ligand:
MPD × 2
(4s)-2-Methyl-2,4-Pentanediol
PDB codes:
6ato
(A),
6atq
(A).
_Cl
10. Metal:
_CL × 2
PDB codes:
1pl1
(A),
1pl2
(A).
11. Ligand:
BOB × 1
(S)-2-Amino-5-((R)-1-(Carboxymethylamino)-3-((3s,4r)-1, 4-Dihydroxynonan-3-Ylthio)-1-Oxopropan-2-
Ylamino)-5- Oxopentanoic acid
PDB code:
3ik9
(A).
12. Ligand:
BWS × 1
L-Gamma-Glutamyl-L-Alanylglycine
PDB code:
6atr
(A).
13. Ligand:
GSN × 1
2-Amino-5-[1-(Carboxylatomethylcarbamoyl)-2- Nitrososulfanyl-Ethyl]amino-5-Oxo-Pentanoate
PDB code:
6atr
(A).
14. Ligand:
GVX × 1
L-Gamma-Glutamyl-S-[(2-Phenylethyl)carbamothioyl]-L- Cysteinylglycine
PDB code:
5jcu
(A).
15. Ligand:
LZ6 × 1
L-Gamma-Glutamyl-S-(2-{[4-(3-Carboxypropyl)phenyl](2- Chloroethyl)amino}ethyl)-L-Cysteinylglycine
PDB code:
4hj2
(A).
16. Ligand:
MES × 1
2-(N-Morpholino)-Ethanesulfonic acid
PDB code:
6atq
(A).
17. Ligand:
P9H × 1
(2~{s})-2-Azanyl-5-[[(2~{r})-1-(2-Hydroxy-2- Oxoethylamino)-1-Oxidanylidene-3-[(1~{r})-3-
Oxidanylidene-1-Phenyl-Propyl]sulfanyl-Propan-2- Yl]amino]-5-Oxidanylidene-Pentanoic acid
PDB code:
6yaw
(A).
Cluster 2 contains 11 ligand types
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Ligand
Description
1. Ligand:
GSH × 7
glutathione
Glutathione
PDB codes:
1gse
(A),
1pkw
(A),
1usb
(A),
3i69
(A),
3i6a
(A),
5lcz
(B),
6ato
(A).
2. Ligand:
GSB × 1
S-Benzyl-Glutathione
PDB code:
1guh
(A).
3. Ligand:
GTX × 4
S-Hexylglutathione
PDB codes:
1k3l
(A),
1k3y
(A),
1ydk
(A),
4. Ligand:
ABY × 2
N-(4-Aminobutanoyl)-S-(4-Methoxybenzyl)-L- Cysteinylglycine
PDB codes:
1pl1
(A),
1pl2
(A).
5. Ligand:
GTX × 4
S-Hexylglutathione
PDB codes:
2r3x
(A),
2r6k
(A),
3ktl
(A),
3l0h
(A).
6. Ligand:
BOB × 1
(S)-2-Amino-5-((R)-1-(Carboxymethylamino)-3-((3s,4r)-1, 4-Dihydroxynonan-3-Ylthio)-1-Oxopropan-2-
Ylamino)-5- Oxopentanoic acid
PDB code:
3ik9
(A).
7. Ligand:
BWS-GSN × 1
BWS
=L-Gamma-Glutamyl-L-Alanylglycine,
GSN
=2-Amino-5-[1-(Carboxylatomethylcarbamoyl)-2- Nitrososulfanyl-Ethyl]amino-5-Oxo-Pentanoate.
PDB code:
6atr
(A).
8. Ligand:
GVX × 1
L-Gamma-Glutamyl-S-[(2-Phenylethyl)carbamothioyl]-L- Cysteinylglycine
PDB code:
5jcu
(A).
9. Ligand:
LZ6 × 1
L-Gamma-Glutamyl-S-(2-{[4-(3-Carboxypropyl)phenyl](2- Chloroethyl)amino}ethyl)-L-Cysteinylglycine
PDB code:
4hj2
(A).
10. Ligand:
MPD × 1
(4s)-2-Methyl-2,4-Pentanediol
PDB code:
6atq
(A).
11. Ligand:
P9H × 1
(2~{s})-2-Azanyl-5-[[(2~{r})-1-(2-Hydroxy-2- Oxoethylamino)-1-Oxidanylidene-3-[(1~{r})-3-
Oxidanylidene-1-Phenyl-Propyl]sulfanyl-Propan-2- Yl]amino]-5-Oxidanylidene-Pentanoic acid
PDB code:
6yaw
(A).
Cluster 3 contains 5 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1k3y
(A).
2. Ligand:
HED × 2
2-Hydroxyethyl disulfide
PDB codes:
1pkw
(A),
1pkz
(A).
3. Ligand:
EDO × 4
1,2-Ethanediol
PDB codes:
5jcu
(A),
6atr
(A),
4. Ligand:
BME-BME × 1
BME
=Beta-Mercaptoethanol.
PDB code:
1gse
(A).
_Cl
5. Metal:
_CL × 1
PDB code:
1usb
(A).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
MPD × 3
(4s)-2-Methyl-2,4-Pentanediol
PDB codes:
6ato
(A),
6atp
(A),
6atq
(A).
2. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
6atr
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
MPD × 2
(4s)-2-Methyl-2,4-Pentanediol
PDB codes:
6ato
(A),
6atp
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
MPD × 3
(4s)-2-Methyl-2,4-Pentanediol
PDB codes:
6ato
(A),
6atp
(A),
6atq
(A).