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EBI
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PDBsum
Ligand clusters for UniProt code P07650
Ligand clusters for P07650: Thymidine phosphorylase OS=Escherichia coli (strain K12) GN=deoA PE=1 SV=3
Top 6 (of 12) ligand clusters
Cluster 1.
2 ligand types
2 ligands
Cluster 2.
2 ligand types
3 ligands
Cluster 3.
1 ligand type
4 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
4 ligands
Representative protein: 2tptA
Structures
PDB
Schematic diagram
2tpt
A
4eaf
A
4lhm
A
4ead
A
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
AZZ × 1
zidovudine
3'-Azido-3'-Deoxythymidine
PDB code:
4lhm
(A).
2. Ligand:
0NP × 1
2',3'-Dideoxy-2'-Fluoro-3'-Triaza-1,2-Dien-2-Ium-1- Yluridine
PDB code:
4ead
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
4eaf
(A),
4lhm
(A).
2. Ligand:
GOL × 1
Glycerol
PDB code:
4ead
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 4
Glycerol
PDB codes:
4ead
(A),
4eaf
(A),
4lhm
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
Glycerol
PDB code:
4ead
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 2
Glycerol
PDB codes:
4eaf
(A),
4lhm
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 4
Sulfate ion
PDB codes:
2tpt
(A),
4ead
(A),
4eaf
(A),
4lhm
(A).