Ligand clusters for UniProt code P07617

Ligand clusters for P07617: Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase OS=Vaccinia virus (strain Western Reserve) OX=10254 GN=PAPS PE=1 SV=1

		5 ligand clusters Cluster 1. 9 ligand types 12 ligands Cluster 2. 3 ligand types 17 ligands Cluster 3. 1 ligand type 1 ligand Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand
Representative protein: 1b42A

Structures

PDB		Schematic diagram
1b42A
1vp3A
4dcgA
1eamA
1vptA
		more ...

Cluster 1 contains 9 ligand types

Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file. Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: 3MA × 1 6-Amino-3-Methylpurine PDB code: 3mag(A).
		2. Ligand: M1A × 1 6-Amino-1-Methylpurine PDB code: 1b42(A).
		3. Ligand: NDM × 1 7,9-Dimethylguanine PDB code: 1jsz(A).
		4. Ligand: M7G × 3 7n-Methyl-8-Hydroguanosine-5'-Diphosphate PDB codes: 1jtf(A), 1v39(A), 2vp3(A).
		5. Ligand: MGT × 1 7n-Methyl-8-Hydroguanosine-5'-Triphosphate PDB code: 1p39(A).
		6. Ligand: MG7 × 2 7-Methylguanosine PDB codes: 1eqa(A), 4dcg(A).
		7. Ligand: MGT × 1 7n-Methyl-8-Hydroguanosine-5'-Triphosphate PDB code: 1av6(A).
		8. Ligand: 1MC × 1 1-Methylcytosine PDB code: 1bky(A).
		9. Ligand: 3MC × 1 3-Methylcytosine PDB code: 3mct(A).

Cluster 2 contains 3 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: SAH × 11 S-Adenosyl-L-Homocysteine PDB codes: 1b42(A), 1eam(A), 1jsz(A), 1jte(A), 1jtf(A), 1p39(A), 1v39(A), 1vp3(A), 1vp9(A), 2vp3(A), 3mag(A).
		2. Ligand: SAM × 1 ademetionine S-Adenosylmethionine PDB code: 1vpt(A).
		3. Ligand: SAH × 5 S-Adenosyl-L-Homocysteine PDB codes: 1av6(A), 1bky(A), 1eqa(A), 3mct(A), 4dcg(A).

Cluster 3 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 3er9(A).

Cluster 4 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 3er9(A).

Cluster 5 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 3er9(A).