Ligand clusters for UniProt code P07328

Ligand clusters for P07328: Nitrogenase molybdenum-iron protein alpha chain from Azotobacter vinelandii

		Top 6 (of 15) ligand clusters Cluster 1. 13 ligand types 75 ligands Cluster 2. 4 ligand types 43 ligands Cluster 3. 2 ligand types 3 ligands Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 6 ligands
Representative protein: 4xpiA

Structures

PDB		Schematic diagram
4xpiA
6op4A
4tkvA
2afiA
5cx1A
		more ...

Cluster 1 contains 13 ligand types

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Ligand		Description
		1. Ligand: HCA × 9 3-Hydroxy-3-Carboxy-Adipic acid PDB codes: 1fp4(A), 1g20(A), 1g21(A), 1m1n(A), 1m34(A), 1n2c(A), 2afh(A), 2afi(A), 2min(A).
		2. Ligand: CFM × 6 Fe-Mo-S cluster PDB codes: 1fp4(A), 1g20(A), 1g21(A), 1m34(A), 1n2c(A), 2min(A).
		3. Ligand: CFN × 3 Fe(7)-Mo-S(9)-N cluster PDB codes: 1m1n(A), 2afh(A), 2afi(A).
		4. Ligand: HCA × 24 3-Hydroxy-3-Carboxy-Adipic acid PDB codes: 3k1a(A), 3u7q(A), 4nd8(A), 4tku(A), 4wna(A), 4xpi(A), 5bvg(A), 5bvh(A), 5cx1(A), 5vq4(A), 6bbl(A), 6o7l(A), 6o7m(A), 6o7n(A), 6o7o(A), 6o7p(A), 6o7q(A), 6o7s(A), 6op2(A), 6op3(A), 6op4(A), 6ug0(A), 6vxt(A), 7jrf(A).
		5. Ligand: ICS × 20 Iron-Sulfur-Molybdenum cluster with interstitial carbon PDB codes: 3u7q(A), 4nd8(A), 4tku(A), 4wna(A), 4xpi(A), 5bvh(A), 5cx1(A), 5vq4(A), 6bbl(A), 6o7l(A), 6o7m(A), 6o7n(A), 6o7o(A), 6o7p(A), 6o7q(A), 6o7s(A), 6op2(A), 6op3(A), 6op4(A), 6vxt(A).
		6. Ligand: HCA-ICS × 5 HCA=3-Hydroxy-3-Carboxy-Adipic acid, ICS=Iron-Sulfur-Molybdenum cluster with interstitial carbon. PDB codes: 4wza(A), 4wzb(A), 6cdk(A), 6o7r(A), 6op1(A).
		7. Ligand: CFN × 1 Fe(7)-Mo-S(9)-N cluster PDB code: 3k1a(A).
		8. Ligand: HCA-CFM × 2 HCA=3-Hydroxy-3-Carboxy-Adipic acid, CFM=Fe-Mo-S cluster. PDB codes: 1m1y(A), 3min(A).
		9. Ligand: HCA-ICE × 1 HCA=3-Hydroxy-3-Carboxy-Adipic acid, ICE=Iron-Sulfur-Molybdenum cluster with interstitial carbon. PDB code: 4tkv(A).
		10. Ligand: ICE × 1 Iron-Sulfur-Molybdenum cluster with interstitial carbon PDB code: 7jrf(A).
		11. Ligand: ICE-HDZ × 1 ICE=Iron-Sulfur-Molybdenum cluster with interstitial carbon, HDZ=Nitrogen molecule. PDB code: 6ug0(A).
		12. Ligand: ICG × 1 Iron-Sulfur-Molybdenum cluster with interstitial carbon with selenium incorporated PDB code: 5bvg(A).
		13. Ligand: ICH × 1 Iron-Sulfur-Molybdenum cluster with interstitial carbon with selenium incorporated PDB code: 5bvh(A).

Cluster 2 contains 4 ligand types

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Ligand		Description
		1. Ligand: CLF × 36 Fe(8)-S(7) cluster PDB codes: 1g20(A), 1g21(A), 1l5h(A), 1m1n(A), 1m1y(A), 1m34(A), 1n2c(A), 2afh(A), 2afi(A), 2min(A), 3k1a(A), 3min(A), 3u7q(A), 4tku(A), 4tkv(A), 4wna(A), 4wza(A), 4wzb(A), 5bvg(A), 5bvh(A), 5cx1(A), 5vq4(A), 6cdk(A), 6o7l(A), 6o7m(A), 6o7n(A), 6o7o(A), 6o7p(A), 6o7q(A), 6o7r(A), 6op1(A), 6op2(A), 6op3(A), 6op4(A), 6vxt(A), 7jrf(A).
		2. Ligand: 1CL × 5 Fe(8)-S(7) cluster, Oxidized PDB codes: 3u7q(A), 4nd8(A), 4xpi(A), 6bbl(A), 6ug0(A).
		3. Ligand: CLP × 1 Fe-S cluster PDB code: 1fp4(A).
		4. Ligand: LPJ × 1 Fe(6)-S(7) cluster PDB code: 6o7s(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 2 glycerin Glycerol PDB codes: 4xpi(A), 6ug0(A).
		2. Ligand: IMD × 1 Imidazole PDB code: 6op3(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: PGE × 1 Triethylene glycol PDB code: 2afh(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: PGE × 1 Triethylene glycol PDB code: 2afh(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: SF4 × 6 Iron/sulfur cluster PDB codes: 1g20(A), 1g21(A), 1m34(A), 1n2c(A), 4wza(A), 4wzb(A).