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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code P06229
Ligand clusters for P06229: T5 flap endonuclease OS=Escherichia phage T5 OX=10726 GN=D15 PE=1 SV=3
Top 6 (of 8) ligand clusters
Cluster 1.
1 ligand type
1 ligand
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
3 ligand types
4 ligands
Cluster 5.
2 ligand types
3 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1ut5A
Structures
PDB
Schematic diagram
1ut5
A
5hml
A
5hmm
A
5hp4
A
Cluster 1 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
5hp4
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
5hml
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 2
1,2-Ethanediol
PDB codes:
5hml
(A),
5hmm
(A).
Cluster 4 contains 3 ligand types
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Ligand
Description
_Mg
1. Metal:
_MG × 2
PDB codes:
5hmm
(A),
_Mn
2. Metal:
_MN × 1
PDB code:
1ut5
(A).
_Ca
3. Metal:
_CA × 1
PDB code:
5hp4
(A).
Cluster 5 contains 2 ligand types
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Ligand
Description
_Mg
1. Metal:
_MG × 2
PDB codes:
5hml
(A),
5hmm
(A).
_Mn
2. Metal:
_MN × 1
PDB code:
1ut5
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
_Cl
1. Metal:
_CL × 1
PDB code:
5hml
(A).