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PDBsum
Ligand clusters for UniProt code P06181
Ligand clusters for P06181: Ligninase H8 OS=Phanerochaete chrysosporium OX=5306 GN=LPOA PE=1 SV=1
6 ligand clusters
Cluster 1.
2 ligand types
5 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
5 ligands
Cluster 6.
1 ligand type
5 ligands
Representative protein: 1b80A
Structures
PDB
Schematic diagram
1b80
A
1b82
A
6iss
A
1b85
A
6a6q
A
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
HEM × 4
Protoporphyrin IX containing fe
PDB codes:
1b80
(A),
1b82
(A),
1b85
(A),
6iss
(A).
2. Ligand:
HEB × 1
Heme b/c
PDB code:
6a6q
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
6a6q
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
6a6q
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
6a6q
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
_Ca
1. Metal:
_CA × 5
PDB codes:
1b80
(A),
1b82
(A),
1b85
(A),
6a6q
(A),
6iss
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
_Ca
1. Metal:
_CA × 5
PDB codes:
1b80
(A),
1b82
(A),
1b85
(A),
6a6q
(A),
6iss
(A).