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EBI
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PDBsum
Ligand clusters for UniProt code P04271
Ligand clusters for P04271: Protein S100-B OS=Homo sapiens OX=9606 GN=S100B PE=1 SV=2
Top 6 (of 8) ligand clusters
Cluster 1.
5 ligand types
5 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
2 ligand types
4 ligands
Cluster 6.
1 ligand type
11 ligands
Representative protein: 5csnA
Structures
PDB
Schematic diagram
5csn
A
3d10
A
5d7f
A
3czt
X
3d0y
A
more ...
Cluster 1 contains 5 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
5d7f
(A).
2. Ligand:
ACT × 1
Acetate ion
PDB code:
3hcm
(A).
3. Ligand:
ARG-THR-GLU-ALA-TRP-LYS-VAL-LEU-SER × 1
PDB code:
4xyn
(A).
4. Ligand:
GLY-PRO-TRP-ASP-SER-VAL-ALA-ARG-VAL-LEU × 1
PDB code:
5d7f
(A).
5. Ligand:
S45 × 1
(3r)-3-[3-(4-Chlorophenyl)-1,2,4-Oxadiazol-5- Yl]piperidine
PDB code:
3hcm
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
5d7f
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
5d7f
(A),
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
5d7f
(A).
Cluster 5 contains 2 ligand types
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Ligand
Description
_Zn
1. Metal:
_ZN × 3
PDB codes:
3czt
(X),
3d0y
(A),
3d10
(A).
_Cl
2. Metal:
_CL × 1
PDB code:
5csj
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
_Ca
1. Metal:
_CA × 11
PDB codes:
2h61
(A),
3czt
(X),
3d0y
(A),
3d10
(A),
3hcm
(A),
4xyn
(A),
5csf
(A),
5csi
(A),
5csj
(A),
5csn
(A),
5d7f
(A).