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Ligand clusters for UniProt code P04063

Ligand clusters for P04063: Alpha-amylase type B isozyme OS=Hordeum vulgare GN=AMY1.2 PE=1 SV=3

5 ligand clusters
Cluster 1.
1 ligand type
1 ligand
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
3 ligands
Cluster 4.
1 ligand type
3 ligands
Cluster 5.
1 ligand type
3 ligands
Representative protein: 1amyA  
JSmol
 

Structures

PDB   Schematic diagram
1amyA    
1bg9A    
1avaA    

 

 Cluster 1 contains 1 ligand type

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Ligand Description


 
1. Ligand: DAF-BGC × 1
DAF=1,4-Deoxy-4-((5-Hydroxymethyl-2,3,4-Trihydroxycyclohex- 5-Enyl)amino)fructose, BGC=Beta-D-Glucose.
PDB code: 1bg9(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: AF1 × 1
4,6-Dideoxy-4-{[(1s,4s,5s,6s)-4,5,6-Trihydroxy-3- (Hydroxymethyl)cyclohex-2-En-1-Yl]amino}-Beta-D-
Glucopyranose
PDB code: 1bg9(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description

_Ca
 
1. Metal: _CA × 3
PDB codes: 1amy(A), 1ava(A), 1bg9(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description

_Ca
 
1. Metal: _CA × 3
PDB codes: 1amy(A), 1ava(A), 1bg9(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description

_Ca
 
1. Metal: _CA × 3
PDB codes: 1amy(A), 1ava(A), 1bg9(A).

 

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