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EBI
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Ligand clusters for UniProt code P02886
Ligand clusters for P02886: Discoidin-1 subunit A OS=Dictyostelium discoideum GN=dscA-1 PE=1 SV=3
Top 6 (of 11) ligand clusters
Cluster 1.
3 ligand types
3 ligands
Cluster 2.
3 ligand types
3 ligands
Cluster 3.
2 ligand types
4 ligands
Cluster 4.
2 ligand types
3 ligands
Cluster 5.
2 ligand types
3 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 2w94A
Structures
PDB
Schematic diagram
2w94
A
2wn2
A
2w95
A
2wn3
A
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
NGA × 1
N-Acetyl-D-Galactosamine
PDB code:
2w95
(A).
2. Ligand:
NGA-A2G-GAL × 1
NGA
=N-Acetyl-D-Galactosamine,
GAL
=Beta-D-Galactose,
A2G
=N-Acetyl-2-Deoxy-2-Amino-Galactose.
PDB code:
2wn2
(A).
3. Ligand:
NGA-GAL × 1
NGA
=N-Acetyl-D-Galactosamine,
GAL
=Beta-D-Galactose.
PDB code:
2wn3
(A).
Cluster 2 contains 3 ligand types
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Ligand
Description
1. Ligand:
NGA × 1
N-Acetyl-D-Galactosamine
PDB code:
2w95
(A).
2. Ligand:
NGA-A2G-GAL × 1
NGA
=N-Acetyl-D-Galactosamine,
GAL
=Beta-D-Galactose,
A2G
=N-Acetyl-2-Deoxy-2-Amino-Galactose.
PDB code:
2wn2
(A).
3. Ligand:
NGA-GAL × 1
NGA
=N-Acetyl-D-Galactosamine,
GAL
=Beta-D-Galactose.
PDB code:
2wn3
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
1PG × 2
2-(2-{2-[2-(2-Methoxy-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)- Ethanol
PDB codes:
2wn2
(A),
2wn3
(A).
2. Ligand:
MPD × 2
(4s)-2-Methyl-2,4-Pentanediol
PDB codes:
2w94
(A),
2w95
(A).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
MPD × 2
(4s)-2-Methyl-2,4-Pentanediol
PDB codes:
2w94
(A),
2w95
(A).
2. Ligand:
GOL × 1
Glycerol
PDB code:
2wn2
(A).
Cluster 5 contains 2 ligand types
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Ligand
Description
1. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
2w94
(A),
2w95
(A).
2. Ligand:
GOL × 1
Glycerol
PDB code:
2wn2
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 2
Glycerol
PDB codes:
2wn2
(A),
2wn3
(A).