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PDBsum
Ligand clusters for UniProt code P02789
Ligand clusters for P02789: Ovotransferrin OS=Gallus gallus PE=1 SV=2
6 ligand clusters
Cluster 1.
2 ligand types
2 ligands
Cluster 2.
6 ligand types
15 ligands
Cluster 3.
5 ligand types
7 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 1aivA
Structures
PDB
Schematic diagram
1aiv
A
1ovt
A
2d3i
A
1n04
A
1iej
A
more ...
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
NAG × 1
n-acetyl-d-glucosamine
N-Acetyl-D-Glucosamine
PDB code:
1iq7
(A).
2. Ligand:
NAG-NDG × 1
NAG
=N-Acetyl-D-Glucosamine,
NDG
=2-(Acetylamino)-2-Deoxy-A-D-Glucopyranose.
PDB code:
1aiv
(A).
Cluster 2 contains 6 ligand types
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Ligand
Description
_Al
1. Metal:
_AL × 1
PDB code:
2d3i
(A).
_Fe
2. Metal:
_FE × 5
PDB codes:
1iej
(A),
1n04
(A),
1nft
(A),
1nnt
(A),
1ovt
(A).
3. Ligand:
CO3 × 4
Carbonate ion
PDB codes:
1iej
(A),
1n04
(A),
1nnt
(A),
1ovt
(A).
4. Ligand:
SO4 × 3
Sulfate ion
PDB codes:
1nft
(A),
1tfa
(A),
5. Ligand:
BCT × 1
Bicarbonate ion
PDB code:
2d3i
(A).
6. Ligand:
NTA × 1
Nitrilotriacetic acid
PDB code:
1nft
(A).
Cluster 3 contains 5 ligand types
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Ligand
Description
_Al
1. Metal:
_AL × 1
PDB code:
2d3i
(A).
2. Ligand:
CO3 × 2
Carbonate ion
PDB codes:
1n04
(A),
1ovt
(A).
_Fe
3. Metal:
_FE × 2
PDB codes:
1n04
(A),
1ovt
(A).
4. Ligand:
BCT × 1
Bicarbonate ion
PDB code:
2d3i
(A).
5. Ligand:
SO4 × 1
Sulfate ion
PDB code:
1iq7
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
FUL × 1
Beta-L-Fucose
PDB code:
1n04
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
1nft
(A),
1tfa
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 2
Sulfate ion
PDB codes:
1nft
(A),
1tfa
(A).