Ligand clusters for UniProt code P02749

Ligand clusters for P02749: Beta-2-glycoprotein 1 OS=Homo sapiens GN=APOH PE=1 SV=3

		Top 6 (of 32) ligand clusters Cluster 1. 5 ligand types 10 ligands Cluster 2. 4 ligand types 5 ligands Cluster 3. 3 ligand types 5 ligands Cluster 4. 4 ligand types 5 ligands Cluster 5. 2 ligand types 4 ligands Cluster 6. 1 ligand type 4 ligands
Representative protein: 1c1zA

Structures

PDB		Schematic diagram
1c1zA
1qubA
6v06A
6v08A
6v09A
		more ...

Cluster 1 contains 5 ligand types

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Ligand		Description
		1. Ligand: SO4 × 5 Sulfate ion PDB codes: 6v06(A), 6v08(A), 6v09(A),
		2. Ligand: NAG-NAG-BMA-MAN-NAG-BMA-MAN-NAG × 2 NAG=N-Acetyl-D-Glucosamine, BMA=Beta-D-Mannose, MAN=Alpha-D-Mannose. PDB codes: 6v06(A), 6v08(A).
		3. Ligand: NAG-NAG-BMA × 1 NAG=N-Acetyl-D-Glucosamine, BMA=Beta-D-Mannose. PDB code: 6v09(A).
		4. Ligand: NAG-NAG-MAN × 1 NAG=N-Acetyl-D-Glucosamine, MAN=Alpha-D-Mannose. PDB code: 1qub(A).
		5. Ligand: NAG-NDG-BMA-BMA-MAN × 1 NDG=2-(Acetylamino)-2-Deoxy-A-D-Glucopyranose, NAG=N-Acetyl-D-Glucosamine, BMA=Beta-D-Mannose, MAN=Alpha-D-Mannose. PDB code: 1c1z(A).

Cluster 2 contains 4 ligand types

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Ligand		Description
		1. Ligand: NAG-NAG-MAN-BMA-MAN × 2 NAG=N-Acetyl-D-Glucosamine, BMA=Beta-D-Mannose, MAN=Alpha-D-Mannose. PDB codes: 6v06(A), 6v08(A).
		2. Ligand: NAG-NAG × 1 NAG=N-Acetyl-D-Glucosamine. PDB code: 1qub(A).
		3. Ligand: NAG-NAG-BMA × 1 NAG=N-Acetyl-D-Glucosamine, BMA=Beta-D-Mannose. PDB code: 6v09(A).
		4. Ligand: NAG-NAG-MAN × 1 NAG=N-Acetyl-D-Glucosamine, MAN=Alpha-D-Mannose. PDB code: 1c1z(A).

Cluster 3 contains 3 ligand types

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Ligand		Description
		1. Ligand: NAG × 2 n-acetylglucosamine N-Acetyl-D-Glucosamine PDB codes: 1qub(A), 6v09(A).
		2. Ligand: NAG-NAG-BMA-MAN-NAG-MAN-MAN-NAG × 2 NAG=N-Acetyl-D-Glucosamine, BMA=Beta-D-Mannose, MAN=Alpha-D-Mannose. PDB codes: 6v06(A), 6v08(A).
		3. Ligand: NDG-NDG × 1 NDG=2-(Acetylamino)-2-Deoxy-A-D-Glucopyranose. PDB code: 1c1z(A).

Cluster 4 contains 4 ligand types

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Ligand		Description
		1. Ligand: NAG × 2 n-acetylglucosamine N-Acetyl-D-Glucosamine PDB codes: 1qub(A), 6v09(A).
		2. Ligand: NAG-NAG × 1 NAG=N-Acetyl-D-Glucosamine. PDB code: 6v08(A).
		3. Ligand: NAG-NAG-BMA-BMA-NAG × 1 NAG=N-Acetyl-D-Glucosamine, BMA=Beta-D-Mannose. PDB code: 6v06(A).
		4. Ligand: NDG × 1 2-(Acetylamino)-2-Deoxy-A-D-Glucopyranose PDB code: 1c1z(A).

Cluster 5 contains 2 ligand types

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Ligand		Description
		1. Ligand: SO4 × 3 Sulfate ion PDB codes: 4jhs(A), 6v09(A),
		2. Ligand: EPE × 1 4-(2-Hydroxyethyl)-1-Piperazine ethanesulfonic acid PDB code: 6v06(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 4 Sulfate ion PDB codes: 3op8(A), 4jhs(A), 6v08(A).