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Ligand clusters for UniProt code P00807

Ligand clusters for P00807: Beta-lactamase from Staphylococcus aureus

Top 6 (of 8) ligand clusters
Cluster 1.
8 ligand types
8 ligands
Cluster 2.
2 ligand types
3 ligands
Cluster 3.
1 ligand type
3 ligands
Cluster 4.
1 ligand type
3 ligands
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 6wgrA  
JSmol
 

Structures

PDB   Schematic diagram
6wgrA    
1djcA    
1ghpA    
1blhA    
1blcA    
 more ...

 

 Cluster 1 contains 8 ligand types

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 1kgg(A).


 
2. Ligand: CED × 1
5-Methyl-2-[2-Oxo-1-(2-Thiophen-2-Yl-Acetylamino)- Ethyl]-3,6-Dihydro-2h-[1,3]thiazine-4-
Carboxylic acid
PDB code: 1ghm(A).


 
3. Ligand: CEM × 1
N-(1-Carboxy-2-Hydroxy-4-Oxo-Butyl)-N-(3-Oxo- Cispropenyl)amine
PDB code: 1blc(A).


 
4. Ligand: CO3 × 1
Carbonate ion
PDB code: 1ghi(A).


 
5. Ligand: EPE × 1
4-(2-Hydroxyethyl)-1-Piperazine ethanesulfonic acid
PDB code: 6wgr(A).


 
6. Ligand: FOS × 1
[[N-(Benzyloxycarbonyl)amino]methyl]phosphate
PDB code: 1blh(A).


 
7. Ligand: PNM × 1
Open form - Penicillin g
PDB code: 1ghp(A).


 
8. Ligand: TEM × 1
N-(2-Hydroxy-4-Oxo-Butyl)-N-(3-Oxo-Transpropenyl)amine
PDB code: 1blc(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: CO3 × 1
Carbonate ion
PDB code: 1ghm(A).


 
2. Ligand: SO4 × 2
Sulfate ion
PDB codes: 1blc(A), 1djc(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 3
Sulfate ion
PDB codes: 1ghm(A), 1ghp(A), 1djc(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 3
Sulfate ion
PDB codes: 1ghm(A), 1ghp(A), 1djc(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 2
Sulfate ion
PDB codes: 1ghm(A), 1ghp(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 1ghm(A).

 

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